Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22071 | 66436;66437;66438 | chr2:178582158;178582157;178582156 | chr2:179446885;179446884;179446883 |
N2AB | 20430 | 61513;61514;61515 | chr2:178582158;178582157;178582156 | chr2:179446885;179446884;179446883 |
N2A | 19503 | 58732;58733;58734 | chr2:178582158;178582157;178582156 | chr2:179446885;179446884;179446883 |
N2B | 13006 | 39241;39242;39243 | chr2:178582158;178582157;178582156 | chr2:179446885;179446884;179446883 |
Novex-1 | 13131 | 39616;39617;39618 | chr2:178582158;178582157;178582156 | chr2:179446885;179446884;179446883 |
Novex-2 | 13198 | 39817;39818;39819 | chr2:178582158;178582157;178582156 | chr2:179446885;179446884;179446883 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | rs968902463 | None | 0.523 | N | 0.639 | 0.234 | 0.367425347029 | gnomAD-4.0.0 | 6.84663E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99705E-07 | 0 | 0 |
H/R | rs968902463 | None | 0.351 | N | 0.354 | 0.138 | 0.244539031024 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/R | rs968902463 | None | 0.351 | N | 0.354 | 0.138 | 0.244539031024 | gnomAD-4.0.0 | 1.86024E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54347E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3016 | likely_benign | 0.3364 | benign | -0.804 | Destabilizing | 0.061 | N | 0.321 | neutral | None | None | None | None | N |
H/C | 0.1608 | likely_benign | 0.1756 | benign | -0.267 | Destabilizing | 0.983 | D | 0.561 | neutral | None | None | None | None | N |
H/D | 0.5061 | ambiguous | 0.4953 | ambiguous | -0.893 | Destabilizing | 0.101 | N | 0.435 | neutral | N | 0.493601787 | None | None | N |
H/E | 0.5529 | ambiguous | 0.5526 | ambiguous | -0.826 | Destabilizing | 0.001 | N | 0.138 | neutral | None | None | None | None | N |
H/F | 0.2229 | likely_benign | 0.2957 | benign | -0.062 | Destabilizing | 0.002 | N | 0.345 | neutral | None | None | None | None | N |
H/G | 0.3902 | ambiguous | 0.3797 | ambiguous | -1.108 | Destabilizing | 0.228 | N | 0.405 | neutral | None | None | None | None | N |
H/I | 0.4965 | ambiguous | 0.5322 | ambiguous | 0.022 | Stabilizing | 0.264 | N | 0.541 | neutral | None | None | None | None | N |
H/K | 0.5504 | ambiguous | 0.5612 | ambiguous | -0.815 | Destabilizing | 0.129 | N | 0.436 | neutral | None | None | None | None | N |
H/L | 0.2847 | likely_benign | 0.3039 | benign | 0.022 | Stabilizing | 0.001 | N | 0.407 | neutral | N | 0.51315034 | None | None | N |
H/M | 0.4656 | ambiguous | 0.5142 | ambiguous | -0.046 | Destabilizing | 0.716 | D | 0.581 | neutral | None | None | None | None | N |
H/N | 0.13 | likely_benign | 0.1339 | benign | -0.767 | Destabilizing | 0.351 | N | 0.358 | neutral | N | 0.479864485 | None | None | N |
H/P | 0.9719 | likely_pathogenic | 0.9693 | pathogenic | -0.234 | Destabilizing | 0.523 | D | 0.639 | neutral | N | 0.476368761 | None | None | N |
H/Q | 0.2744 | likely_benign | 0.3042 | benign | -0.582 | Destabilizing | 0.213 | N | 0.385 | neutral | N | 0.462105444 | None | None | N |
H/R | 0.294 | likely_benign | 0.308 | benign | -1.043 | Destabilizing | 0.351 | N | 0.354 | neutral | N | 0.461105366 | None | None | N |
H/S | 0.1698 | likely_benign | 0.1818 | benign | -0.812 | Destabilizing | 0.012 | N | 0.195 | neutral | None | None | None | None | N |
H/T | 0.228 | likely_benign | 0.2577 | benign | -0.66 | Destabilizing | 0.129 | N | 0.416 | neutral | None | None | None | None | N |
H/V | 0.3876 | ambiguous | 0.4257 | ambiguous | -0.234 | Destabilizing | 0.129 | N | 0.458 | neutral | None | None | None | None | N |
H/W | 0.5011 | ambiguous | 0.5619 | ambiguous | -0.003 | Destabilizing | 0.983 | D | 0.559 | neutral | None | None | None | None | N |
H/Y | 0.1089 | likely_benign | 0.1309 | benign | 0.279 | Stabilizing | 0.213 | N | 0.365 | neutral | N | 0.469090131 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.