Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22085 | 66478;66479;66480 | chr2:178582116;178582115;178582114 | chr2:179446843;179446842;179446841 |
N2AB | 20444 | 61555;61556;61557 | chr2:178582116;178582115;178582114 | chr2:179446843;179446842;179446841 |
N2A | 19517 | 58774;58775;58776 | chr2:178582116;178582115;178582114 | chr2:179446843;179446842;179446841 |
N2B | 13020 | 39283;39284;39285 | chr2:178582116;178582115;178582114 | chr2:179446843;179446842;179446841 |
Novex-1 | 13145 | 39658;39659;39660 | chr2:178582116;178582115;178582114 | chr2:179446843;179446842;179446841 |
Novex-2 | 13212 | 39859;39860;39861 | chr2:178582116;178582115;178582114 | chr2:179446843;179446842;179446841 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs2047911570 | None | 0.684 | N | 0.661 | 0.376 | 0.514923749907 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/L | rs2047911570 | None | 0.684 | N | 0.661 | 0.376 | 0.514923749907 | gnomAD-4.0.0 | 2.03012E-06 | None | None | None | None | I | None | 0 | 6.15536E-05 | None | 0 | 0 | None | 0 | 0 | 1.205E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1997 | likely_benign | 0.1491 | benign | -0.522 | Destabilizing | 0.012 | N | 0.276 | neutral | N | 0.456182336 | None | None | I |
S/C | 0.1594 | likely_benign | 0.0925 | benign | -0.352 | Destabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | I |
S/D | 0.9549 | likely_pathogenic | 0.8998 | pathogenic | -0.58 | Destabilizing | 0.742 | D | 0.703 | prob.neutral | None | None | None | None | I |
S/E | 0.9528 | likely_pathogenic | 0.8979 | pathogenic | -0.631 | Destabilizing | 0.59 | D | 0.632 | neutral | None | None | None | None | I |
S/F | 0.6494 | likely_pathogenic | 0.4866 | ambiguous | -0.926 | Destabilizing | 0.984 | D | 0.756 | deleterious | None | None | None | None | I |
S/G | 0.4314 | ambiguous | 0.3037 | benign | -0.711 | Destabilizing | 0.373 | N | 0.625 | neutral | None | None | None | None | I |
S/H | 0.7239 | likely_pathogenic | 0.601 | pathogenic | -1.326 | Destabilizing | 0.953 | D | 0.705 | prob.neutral | None | None | None | None | I |
S/I | 0.758 | likely_pathogenic | 0.5555 | ambiguous | -0.139 | Destabilizing | 0.91 | D | 0.759 | deleterious | None | None | None | None | I |
S/K | 0.9816 | likely_pathogenic | 0.9519 | pathogenic | -0.741 | Destabilizing | 0.009 | N | 0.405 | neutral | None | None | None | None | I |
S/L | 0.3557 | ambiguous | 0.2067 | benign | -0.139 | Destabilizing | 0.684 | D | 0.661 | neutral | N | 0.478360678 | None | None | I |
S/M | 0.494 | ambiguous | 0.3552 | ambiguous | 0.313 | Stabilizing | 0.984 | D | 0.705 | prob.neutral | None | None | None | None | I |
S/N | 0.4194 | ambiguous | 0.3054 | benign | -0.607 | Destabilizing | 0.742 | D | 0.709 | prob.delet. | None | None | None | None | I |
S/P | 0.9956 | likely_pathogenic | 0.992 | pathogenic | -0.235 | Destabilizing | 0.939 | D | 0.717 | prob.delet. | N | 0.513101158 | None | None | I |
S/Q | 0.8643 | likely_pathogenic | 0.7663 | pathogenic | -0.89 | Destabilizing | 0.91 | D | 0.739 | prob.delet. | None | None | None | None | I |
S/R | 0.9686 | likely_pathogenic | 0.9223 | pathogenic | -0.52 | Destabilizing | 0.59 | D | 0.723 | prob.delet. | None | None | None | None | I |
S/T | 0.3992 | ambiguous | 0.2768 | benign | -0.603 | Destabilizing | 0.028 | N | 0.365 | neutral | N | 0.469535587 | None | None | I |
S/V | 0.672 | likely_pathogenic | 0.4708 | ambiguous | -0.235 | Destabilizing | 0.742 | D | 0.675 | prob.neutral | None | None | None | None | I |
S/W | 0.8207 | likely_pathogenic | 0.7337 | pathogenic | -0.92 | Destabilizing | 0.996 | D | 0.74 | deleterious | None | None | None | None | I |
S/Y | 0.5698 | likely_pathogenic | 0.4254 | ambiguous | -0.649 | Destabilizing | 0.984 | D | 0.75 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.