Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22086 | 66481;66482;66483 | chr2:178582113;178582112;178582111 | chr2:179446840;179446839;179446838 |
N2AB | 20445 | 61558;61559;61560 | chr2:178582113;178582112;178582111 | chr2:179446840;179446839;179446838 |
N2A | 19518 | 58777;58778;58779 | chr2:178582113;178582112;178582111 | chr2:179446840;179446839;179446838 |
N2B | 13021 | 39286;39287;39288 | chr2:178582113;178582112;178582111 | chr2:179446840;179446839;179446838 |
Novex-1 | 13146 | 39661;39662;39663 | chr2:178582113;178582112;178582111 | chr2:179446840;179446839;179446838 |
Novex-2 | 13213 | 39862;39863;39864 | chr2:178582113;178582112;178582111 | chr2:179446840;179446839;179446838 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.489 | N | 0.553 | 0.226 | 0.231873229951 | gnomAD-4.0.0 | 6.84592E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99641E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1059 | likely_benign | 0.0771 | benign | -0.54 | Destabilizing | 0.489 | N | 0.553 | neutral | N | 0.47218216 | None | None | N |
P/C | 0.7365 | likely_pathogenic | 0.5595 | ambiguous | -0.555 | Destabilizing | 0.998 | D | 0.696 | prob.neutral | None | None | None | None | N |
P/D | 0.6457 | likely_pathogenic | 0.4189 | ambiguous | -0.313 | Destabilizing | 0.956 | D | 0.57 | neutral | None | None | None | None | N |
P/E | 0.4076 | ambiguous | 0.2444 | benign | -0.434 | Destabilizing | 0.956 | D | 0.579 | neutral | None | None | None | None | N |
P/F | 0.7456 | likely_pathogenic | 0.5796 | pathogenic | -0.812 | Destabilizing | 0.978 | D | 0.695 | prob.neutral | None | None | None | None | N |
P/G | 0.5264 | ambiguous | 0.3547 | ambiguous | -0.679 | Destabilizing | 0.754 | D | 0.591 | neutral | None | None | None | None | N |
P/H | 0.4004 | ambiguous | 0.2557 | benign | -0.284 | Destabilizing | 0.997 | D | 0.657 | neutral | N | 0.507353939 | None | None | N |
P/I | 0.4055 | ambiguous | 0.2962 | benign | -0.327 | Destabilizing | 0.956 | D | 0.717 | prob.delet. | None | None | None | None | N |
P/K | 0.5012 | ambiguous | 0.3204 | benign | -0.382 | Destabilizing | 0.956 | D | 0.575 | neutral | None | None | None | None | N |
P/L | 0.2042 | likely_benign | 0.1456 | benign | -0.327 | Destabilizing | 0.822 | D | 0.61 | neutral | N | 0.511076922 | None | None | N |
P/M | 0.3814 | ambiguous | 0.2782 | benign | -0.226 | Destabilizing | 0.998 | D | 0.659 | neutral | None | None | None | None | N |
P/N | 0.4788 | ambiguous | 0.308 | benign | -0.095 | Destabilizing | 0.956 | D | 0.629 | neutral | None | None | None | None | N |
P/Q | 0.2614 | likely_benign | 0.1623 | benign | -0.375 | Destabilizing | 0.956 | D | 0.637 | neutral | None | None | None | None | N |
P/R | 0.4306 | ambiguous | 0.256 | benign | 0.153 | Stabilizing | 0.942 | D | 0.689 | prob.neutral | N | 0.486780922 | None | None | N |
P/S | 0.2128 | likely_benign | 0.13 | benign | -0.476 | Destabilizing | 0.125 | N | 0.34 | neutral | N | 0.469055061 | None | None | N |
P/T | 0.1397 | likely_benign | 0.0974 | benign | -0.495 | Destabilizing | 0.058 | N | 0.273 | neutral | N | 0.475068995 | None | None | N |
P/V | 0.2465 | likely_benign | 0.1842 | benign | -0.363 | Destabilizing | 0.86 | D | 0.579 | neutral | None | None | None | None | N |
P/W | 0.8862 | likely_pathogenic | 0.7628 | pathogenic | -0.88 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
P/Y | 0.7181 | likely_pathogenic | 0.5349 | ambiguous | -0.567 | Destabilizing | 0.993 | D | 0.696 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.