Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22087 | 66484;66485;66486 | chr2:178582110;178582109;178582108 | chr2:179446837;179446836;179446835 |
N2AB | 20446 | 61561;61562;61563 | chr2:178582110;178582109;178582108 | chr2:179446837;179446836;179446835 |
N2A | 19519 | 58780;58781;58782 | chr2:178582110;178582109;178582108 | chr2:179446837;179446836;179446835 |
N2B | 13022 | 39289;39290;39291 | chr2:178582110;178582109;178582108 | chr2:179446837;179446836;179446835 |
Novex-1 | 13147 | 39664;39665;39666 | chr2:178582110;178582109;178582108 | chr2:179446837;179446836;179446835 |
Novex-2 | 13214 | 39865;39866;39867 | chr2:178582110;178582109;178582108 | chr2:179446837;179446836;179446835 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.993 | D | 0.377 | 0.267 | 0.59450981025 | gnomAD-4.0.0 | 1.59318E-06 | None | None | None | None | I | None | 5.6638E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9809 | likely_pathogenic | 0.9621 | pathogenic | -2.383 | Highly Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | I |
I/C | 0.9914 | likely_pathogenic | 0.9807 | pathogenic | -1.536 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
I/D | 0.9995 | likely_pathogenic | 0.9988 | pathogenic | -2.595 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | I |
I/E | 0.9975 | likely_pathogenic | 0.9949 | pathogenic | -2.468 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
I/F | 0.975 | likely_pathogenic | 0.9385 | pathogenic | -1.578 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.551693205 | None | None | I |
I/G | 0.9987 | likely_pathogenic | 0.9968 | pathogenic | -2.837 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
I/H | 0.9992 | likely_pathogenic | 0.9974 | pathogenic | -2.238 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
I/K | 0.9964 | likely_pathogenic | 0.9924 | pathogenic | -1.81 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | I |
I/L | 0.6048 | likely_pathogenic | 0.4231 | ambiguous | -1.115 | Destabilizing | 0.993 | D | 0.401 | neutral | N | 0.494075531 | None | None | I |
I/M | 0.7941 | likely_pathogenic | 0.6476 | pathogenic | -0.851 | Destabilizing | 1.0 | D | 0.816 | deleterious | D | 0.5542281 | None | None | I |
I/N | 0.9916 | likely_pathogenic | 0.9828 | pathogenic | -1.908 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.543721169 | None | None | I |
I/P | 0.9808 | likely_pathogenic | 0.9725 | pathogenic | -1.514 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | I |
I/Q | 0.9975 | likely_pathogenic | 0.994 | pathogenic | -1.94 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
I/R | 0.9954 | likely_pathogenic | 0.9902 | pathogenic | -1.3 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | I |
I/S | 0.9921 | likely_pathogenic | 0.9826 | pathogenic | -2.542 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.5429607 | None | None | I |
I/T | 0.9787 | likely_pathogenic | 0.9629 | pathogenic | -2.292 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.51827308 | None | None | I |
I/V | 0.0942 | likely_benign | 0.0817 | benign | -1.514 | Destabilizing | 0.993 | D | 0.377 | neutral | D | 0.523332835 | None | None | I |
I/W | 0.9997 | likely_pathogenic | 0.999 | pathogenic | -1.915 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
I/Y | 0.9974 | likely_pathogenic | 0.9934 | pathogenic | -1.652 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.