Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22098 | 66517;66518;66519 | chr2:178582077;178582076;178582075 | chr2:179446804;179446803;179446802 |
N2AB | 20457 | 61594;61595;61596 | chr2:178582077;178582076;178582075 | chr2:179446804;179446803;179446802 |
N2A | 19530 | 58813;58814;58815 | chr2:178582077;178582076;178582075 | chr2:179446804;179446803;179446802 |
N2B | 13033 | 39322;39323;39324 | chr2:178582077;178582076;178582075 | chr2:179446804;179446803;179446802 |
Novex-1 | 13158 | 39697;39698;39699 | chr2:178582077;178582076;178582075 | chr2:179446804;179446803;179446802 |
Novex-2 | 13225 | 39898;39899;39900 | chr2:178582077;178582076;178582075 | chr2:179446804;179446803;179446802 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | None | N | 0.207 | 0.122 | 0.12205267543 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86025E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1321 | likely_benign | 0.13 | benign | -0.124 | Destabilizing | 0.031 | N | 0.301 | neutral | None | None | None | None | N |
Q/C | 0.5878 | likely_pathogenic | 0.6246 | pathogenic | -0.257 | Destabilizing | 0.864 | D | 0.189 | neutral | None | None | None | None | N |
Q/D | 0.2947 | likely_benign | 0.2564 | benign | -0.356 | Destabilizing | 0.072 | N | 0.245 | neutral | None | None | None | None | N |
Q/E | 0.0929 | likely_benign | 0.0855 | benign | -0.42 | Destabilizing | 0.012 | N | 0.217 | neutral | N | 0.439095298 | None | None | N |
Q/F | 0.6342 | likely_pathogenic | 0.6524 | pathogenic | -0.586 | Destabilizing | 0.214 | N | 0.225 | neutral | None | None | None | None | N |
Q/G | 0.1782 | likely_benign | 0.1733 | benign | -0.195 | Destabilizing | 0.031 | N | 0.268 | neutral | None | None | None | None | N |
Q/H | 0.1647 | likely_benign | 0.1784 | benign | 0.022 | Stabilizing | None | N | 0.207 | neutral | N | 0.436788499 | None | None | N |
Q/I | 0.3868 | ambiguous | 0.4093 | ambiguous | -0.034 | Destabilizing | 0.214 | N | 0.267 | neutral | None | None | None | None | N |
Q/K | 0.0697 | likely_benign | 0.0786 | benign | -0.149 | Destabilizing | None | N | 0.157 | neutral | N | 0.38861055 | None | None | N |
Q/L | 0.1261 | likely_benign | 0.1247 | benign | -0.034 | Destabilizing | 0.024 | N | 0.264 | neutral | N | 0.461049438 | None | None | N |
Q/M | 0.273 | likely_benign | 0.2791 | benign | -0.073 | Destabilizing | 0.628 | D | 0.231 | neutral | None | None | None | None | N |
Q/N | 0.1888 | likely_benign | 0.187 | benign | -0.354 | Destabilizing | 0.038 | N | 0.247 | neutral | None | None | None | None | N |
Q/P | 0.3025 | likely_benign | 0.2233 | benign | -0.044 | Destabilizing | 0.106 | N | 0.287 | neutral | N | 0.456355695 | None | None | N |
Q/R | 0.0918 | likely_benign | 0.095 | benign | 0.072 | Stabilizing | 0.012 | N | 0.301 | neutral | N | 0.435305632 | None | None | N |
Q/S | 0.1547 | likely_benign | 0.1427 | benign | -0.336 | Destabilizing | 0.016 | N | 0.261 | neutral | None | None | None | None | N |
Q/T | 0.1261 | likely_benign | 0.1304 | benign | -0.297 | Destabilizing | None | N | 0.17 | neutral | None | None | None | None | N |
Q/V | 0.2301 | likely_benign | 0.2219 | benign | -0.044 | Destabilizing | 0.072 | N | 0.277 | neutral | None | None | None | None | N |
Q/W | 0.6021 | likely_pathogenic | 0.6114 | pathogenic | -0.681 | Destabilizing | 0.864 | D | 0.209 | neutral | None | None | None | None | N |
Q/Y | 0.434 | ambiguous | 0.4292 | ambiguous | -0.392 | Destabilizing | 0.12 | N | 0.258 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.