Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22100 | 66523;66524;66525 | chr2:178582071;178582070;178582069 | chr2:179446798;179446797;179446796 |
N2AB | 20459 | 61600;61601;61602 | chr2:178582071;178582070;178582069 | chr2:179446798;179446797;179446796 |
N2A | 19532 | 58819;58820;58821 | chr2:178582071;178582070;178582069 | chr2:179446798;179446797;179446796 |
N2B | 13035 | 39328;39329;39330 | chr2:178582071;178582070;178582069 | chr2:179446798;179446797;179446796 |
Novex-1 | 13160 | 39703;39704;39705 | chr2:178582071;178582070;178582069 | chr2:179446798;179446797;179446796 |
Novex-2 | 13227 | 39904;39905;39906 | chr2:178582071;178582070;178582069 | chr2:179446798;179446797;179446796 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | None | N | 0.069 | 0.042 | 0.256283259241 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1313 | likely_benign | 0.1637 | benign | -0.335 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.502106627 | None | None | N |
V/C | 0.604 | likely_pathogenic | 0.6777 | pathogenic | -0.775 | Destabilizing | 0.944 | D | 0.287 | neutral | None | None | None | None | N |
V/D | 0.3648 | ambiguous | 0.4134 | ambiguous | -0.367 | Destabilizing | 0.773 | D | 0.355 | neutral | N | 0.469860923 | None | None | N |
V/E | 0.3061 | likely_benign | 0.3489 | ambiguous | -0.482 | Destabilizing | 0.69 | D | 0.341 | neutral | None | None | None | None | N |
V/F | 0.1456 | likely_benign | 0.1828 | benign | -0.724 | Destabilizing | 0.001 | N | 0.32 | neutral | N | 0.468824344 | None | None | N |
V/G | 0.1517 | likely_benign | 0.1804 | benign | -0.391 | Destabilizing | 0.193 | N | 0.332 | neutral | N | 0.439457871 | None | None | N |
V/H | 0.4779 | ambiguous | 0.5789 | pathogenic | 0.01 | Stabilizing | 0.981 | D | 0.339 | neutral | None | None | None | None | N |
V/I | 0.0664 | likely_benign | 0.0752 | benign | -0.328 | Destabilizing | 0.001 | N | 0.201 | neutral | N | 0.510438109 | None | None | N |
V/K | 0.3402 | ambiguous | 0.3966 | ambiguous | -0.391 | Destabilizing | 0.69 | D | 0.338 | neutral | None | None | None | None | N |
V/L | 0.109 | likely_benign | 0.1524 | benign | -0.328 | Destabilizing | None | N | 0.069 | neutral | N | 0.440692809 | None | None | N |
V/M | 0.1064 | likely_benign | 0.1373 | benign | -0.592 | Destabilizing | 0.69 | D | 0.277 | neutral | None | None | None | None | N |
V/N | 0.1913 | likely_benign | 0.2592 | benign | -0.172 | Destabilizing | 0.818 | D | 0.349 | neutral | None | None | None | None | N |
V/P | 0.2922 | likely_benign | 0.3693 | ambiguous | -0.304 | Destabilizing | 0.818 | D | 0.345 | neutral | None | None | None | None | N |
V/Q | 0.2568 | likely_benign | 0.3111 | benign | -0.384 | Destabilizing | 0.818 | D | 0.321 | neutral | None | None | None | None | N |
V/R | 0.3174 | likely_benign | 0.3539 | ambiguous | 0.05 | Stabilizing | 0.69 | D | 0.357 | neutral | None | None | None | None | N |
V/S | 0.1526 | likely_benign | 0.1967 | benign | -0.475 | Destabilizing | 0.241 | N | 0.333 | neutral | None | None | None | None | N |
V/T | 0.1493 | likely_benign | 0.1843 | benign | -0.502 | Destabilizing | 0.388 | N | 0.226 | neutral | None | None | None | None | N |
V/W | 0.6736 | likely_pathogenic | 0.7402 | pathogenic | -0.779 | Destabilizing | 0.981 | D | 0.351 | neutral | None | None | None | None | N |
V/Y | 0.4182 | ambiguous | 0.4856 | ambiguous | -0.507 | Destabilizing | 0.527 | D | 0.313 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.