Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22112 | 66559;66560;66561 | chr2:178582035;178582034;178582033 | chr2:179446762;179446761;179446760 |
N2AB | 20471 | 61636;61637;61638 | chr2:178582035;178582034;178582033 | chr2:179446762;179446761;179446760 |
N2A | 19544 | 58855;58856;58857 | chr2:178582035;178582034;178582033 | chr2:179446762;179446761;179446760 |
N2B | 13047 | 39364;39365;39366 | chr2:178582035;178582034;178582033 | chr2:179446762;179446761;179446760 |
Novex-1 | 13172 | 39739;39740;39741 | chr2:178582035;178582034;178582033 | chr2:179446762;179446761;179446760 |
Novex-2 | 13239 | 39940;39941;39942 | chr2:178582035;178582034;178582033 | chr2:179446762;179446761;179446760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.946 | N | 0.465 | 0.17 | 0.212008924253 | gnomAD-4.0.0 | 1.59214E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5892 | likely_pathogenic | 0.468 | ambiguous | -0.185 | Destabilizing | 0.896 | D | 0.516 | neutral | N | 0.475960176 | None | None | I |
E/C | 0.9724 | likely_pathogenic | 0.9567 | pathogenic | -0.337 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/D | 0.1578 | likely_benign | 0.1365 | benign | -0.605 | Destabilizing | 0.004 | N | 0.174 | neutral | N | 0.432516043 | None | None | I |
E/F | 0.9755 | likely_pathogenic | 0.9554 | pathogenic | 0.427 | Stabilizing | 0.996 | D | 0.654 | neutral | None | None | None | None | I |
E/G | 0.5157 | ambiguous | 0.4138 | ambiguous | -0.472 | Destabilizing | 0.896 | D | 0.522 | neutral | N | 0.4932765 | None | None | I |
E/H | 0.9032 | likely_pathogenic | 0.826 | pathogenic | 0.795 | Stabilizing | 0.996 | D | 0.533 | neutral | None | None | None | None | I |
E/I | 0.9123 | likely_pathogenic | 0.8328 | pathogenic | 0.569 | Stabilizing | 0.988 | D | 0.649 | neutral | None | None | None | None | I |
E/K | 0.7537 | likely_pathogenic | 0.5962 | pathogenic | 0.274 | Stabilizing | 0.896 | D | 0.497 | neutral | N | 0.483694224 | None | None | I |
E/L | 0.8896 | likely_pathogenic | 0.8022 | pathogenic | 0.569 | Stabilizing | 0.988 | D | 0.623 | neutral | None | None | None | None | I |
E/M | 0.9272 | likely_pathogenic | 0.8681 | pathogenic | 0.416 | Stabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | I |
E/N | 0.6486 | likely_pathogenic | 0.5341 | ambiguous | -0.516 | Destabilizing | 0.851 | D | 0.491 | neutral | None | None | None | None | I |
E/P | 0.9222 | likely_pathogenic | 0.8845 | pathogenic | 0.339 | Stabilizing | 0.988 | D | 0.547 | neutral | None | None | None | None | I |
E/Q | 0.5128 | ambiguous | 0.3749 | ambiguous | -0.369 | Destabilizing | 0.946 | D | 0.465 | neutral | N | 0.492564424 | None | None | I |
E/R | 0.8334 | likely_pathogenic | 0.7306 | pathogenic | 0.693 | Stabilizing | 0.988 | D | 0.516 | neutral | None | None | None | None | I |
E/S | 0.5737 | likely_pathogenic | 0.4645 | ambiguous | -0.644 | Destabilizing | 0.919 | D | 0.489 | neutral | None | None | None | None | I |
E/T | 0.7089 | likely_pathogenic | 0.5674 | pathogenic | -0.38 | Destabilizing | 0.959 | D | 0.519 | neutral | None | None | None | None | I |
E/V | 0.7999 | likely_pathogenic | 0.6654 | pathogenic | 0.339 | Stabilizing | 0.984 | D | 0.555 | neutral | N | 0.505571007 | None | None | I |
E/W | 0.9898 | likely_pathogenic | 0.9828 | pathogenic | 0.664 | Stabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | I |
E/Y | 0.9397 | likely_pathogenic | 0.8978 | pathogenic | 0.706 | Stabilizing | 0.996 | D | 0.643 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.