Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22113 | 66562;66563;66564 | chr2:178582032;178582031;178582030 | chr2:179446759;179446758;179446757 |
N2AB | 20472 | 61639;61640;61641 | chr2:178582032;178582031;178582030 | chr2:179446759;179446758;179446757 |
N2A | 19545 | 58858;58859;58860 | chr2:178582032;178582031;178582030 | chr2:179446759;179446758;179446757 |
N2B | 13048 | 39367;39368;39369 | chr2:178582032;178582031;178582030 | chr2:179446759;179446758;179446757 |
Novex-1 | 13173 | 39742;39743;39744 | chr2:178582032;178582031;178582030 | chr2:179446759;179446758;179446757 |
Novex-2 | 13240 | 39943;39944;39945 | chr2:178582032;178582031;178582030 | chr2:179446759;179446758;179446757 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs748719400 | -0.37 | 0.997 | N | 0.552 | 0.258 | 0.233785782151 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86044E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8556 | likely_pathogenic | 0.7622 | pathogenic | -1.133 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | I |
R/C | 0.4557 | ambiguous | 0.3055 | benign | -1.228 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
R/D | 0.9333 | likely_pathogenic | 0.8851 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
R/E | 0.7964 | likely_pathogenic | 0.6784 | pathogenic | -0.476 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
R/F | 0.9514 | likely_pathogenic | 0.9039 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
R/G | 0.7107 | likely_pathogenic | 0.5659 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.482961672 | None | None | I |
R/H | 0.4043 | ambiguous | 0.2647 | benign | -1.512 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
R/I | 0.8199 | likely_pathogenic | 0.6838 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.470844898 | None | None | I |
R/K | 0.2637 | likely_benign | 0.1996 | benign | -0.804 | Destabilizing | 0.997 | D | 0.552 | neutral | N | 0.496255303 | None | None | I |
R/L | 0.6266 | likely_pathogenic | 0.4805 | ambiguous | -0.158 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
R/M | 0.7322 | likely_pathogenic | 0.5773 | pathogenic | -0.764 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
R/N | 0.853 | likely_pathogenic | 0.7718 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
R/P | 0.8374 | likely_pathogenic | 0.719 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
R/Q | 0.3254 | likely_benign | 0.2115 | benign | -0.883 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
R/S | 0.9159 | likely_pathogenic | 0.8468 | pathogenic | -1.651 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.507317659 | None | None | I |
R/T | 0.6731 | likely_pathogenic | 0.502 | ambiguous | -1.233 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.422445404 | None | None | I |
R/V | 0.8166 | likely_pathogenic | 0.6998 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
R/W | 0.6896 | likely_pathogenic | 0.5025 | ambiguous | -0.255 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
R/Y | 0.8205 | likely_pathogenic | 0.6898 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.