Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22119 | 66580;66581;66582 | chr2:178582014;178582013;178582012 | chr2:179446741;179446740;179446739 |
N2AB | 20478 | 61657;61658;61659 | chr2:178582014;178582013;178582012 | chr2:179446741;179446740;179446739 |
N2A | 19551 | 58876;58877;58878 | chr2:178582014;178582013;178582012 | chr2:179446741;179446740;179446739 |
N2B | 13054 | 39385;39386;39387 | chr2:178582014;178582013;178582012 | chr2:179446741;179446740;179446739 |
Novex-1 | 13179 | 39760;39761;39762 | chr2:178582014;178582013;178582012 | chr2:179446741;179446740;179446739 |
Novex-2 | 13246 | 39961;39962;39963 | chr2:178582014;178582013;178582012 | chr2:179446741;179446740;179446739 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs901951990 | -0.28 | 0.698 | N | 0.381 | 0.208 | 0.214338557667 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2151 | likely_benign | 0.258 | benign | -0.315 | Destabilizing | 0.822 | D | 0.395 | neutral | N | 0.494401018 | None | None | N |
G/C | 0.3414 | ambiguous | 0.3604 | ambiguous | -0.821 | Destabilizing | 0.997 | D | 0.639 | neutral | N | 0.518545661 | None | None | N |
G/D | 0.4839 | ambiguous | 0.5307 | ambiguous | -0.531 | Destabilizing | 0.698 | D | 0.413 | neutral | N | 0.47626682 | None | None | N |
G/E | 0.5815 | likely_pathogenic | 0.6506 | pathogenic | -0.664 | Destabilizing | 0.076 | N | 0.322 | neutral | None | None | None | None | N |
G/F | 0.7833 | likely_pathogenic | 0.8272 | pathogenic | -0.94 | Destabilizing | 0.993 | D | 0.595 | neutral | None | None | None | None | N |
G/H | 0.6044 | likely_pathogenic | 0.6336 | pathogenic | -0.65 | Destabilizing | 0.978 | D | 0.531 | neutral | None | None | None | None | N |
G/I | 0.6072 | likely_pathogenic | 0.6997 | pathogenic | -0.311 | Destabilizing | 0.978 | D | 0.589 | neutral | None | None | None | None | N |
G/K | 0.8177 | likely_pathogenic | 0.8384 | pathogenic | -0.861 | Destabilizing | 0.754 | D | 0.448 | neutral | None | None | None | None | N |
G/L | 0.6369 | likely_pathogenic | 0.7113 | pathogenic | -0.311 | Destabilizing | 0.956 | D | 0.557 | neutral | None | None | None | None | N |
G/M | 0.634 | likely_pathogenic | 0.7059 | pathogenic | -0.443 | Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | N |
G/N | 0.3006 | likely_benign | 0.3643 | ambiguous | -0.468 | Destabilizing | 0.043 | N | 0.257 | neutral | None | None | None | None | N |
G/P | 0.9386 | likely_pathogenic | 0.9583 | pathogenic | -0.276 | Destabilizing | 0.993 | D | 0.509 | neutral | None | None | None | None | N |
G/Q | 0.5741 | likely_pathogenic | 0.6249 | pathogenic | -0.703 | Destabilizing | 0.193 | N | 0.301 | neutral | None | None | None | None | N |
G/R | 0.7121 | likely_pathogenic | 0.7182 | pathogenic | -0.468 | Destabilizing | 0.942 | D | 0.499 | neutral | N | 0.470029339 | None | None | N |
G/S | 0.1303 | likely_benign | 0.1553 | benign | -0.644 | Destabilizing | 0.698 | D | 0.381 | neutral | N | 0.469268871 | None | None | N |
G/T | 0.2859 | likely_benign | 0.354 | ambiguous | -0.696 | Destabilizing | 0.86 | D | 0.473 | neutral | None | None | None | None | N |
G/V | 0.4643 | ambiguous | 0.5518 | ambiguous | -0.276 | Destabilizing | 0.97 | D | 0.561 | neutral | N | 0.518292171 | None | None | N |
G/W | 0.7226 | likely_pathogenic | 0.724 | pathogenic | -1.148 | Destabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
G/Y | 0.6684 | likely_pathogenic | 0.7085 | pathogenic | -0.769 | Destabilizing | 0.993 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.