Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22120 | 66583;66584;66585 | chr2:178582011;178582010;178582009 | chr2:179446738;179446737;179446736 |
N2AB | 20479 | 61660;61661;61662 | chr2:178582011;178582010;178582009 | chr2:179446738;179446737;179446736 |
N2A | 19552 | 58879;58880;58881 | chr2:178582011;178582010;178582009 | chr2:179446738;179446737;179446736 |
N2B | 13055 | 39388;39389;39390 | chr2:178582011;178582010;178582009 | chr2:179446738;179446737;179446736 |
Novex-1 | 13180 | 39763;39764;39765 | chr2:178582011;178582010;178582009 | chr2:179446738;179446737;179446736 |
Novex-2 | 13247 | 39964;39965;39966 | chr2:178582011;178582010;178582009 | chr2:179446738;179446737;179446736 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 1.0 | D | 0.853 | 0.887 | 0.927402277902 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86026E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.983 | likely_pathogenic | 0.9843 | pathogenic | -2.562 | Highly Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
L/C | 0.9541 | likely_pathogenic | 0.9606 | pathogenic | -2.097 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -2.953 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/E | 0.9973 | likely_pathogenic | 0.9975 | pathogenic | -2.835 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/F | 0.8498 | likely_pathogenic | 0.8595 | pathogenic | -1.776 | Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.650582033 | None | None | N |
L/G | 0.9945 | likely_pathogenic | 0.9948 | pathogenic | -3.022 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
L/H | 0.9937 | likely_pathogenic | 0.9938 | pathogenic | -2.301 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.667408611 | None | None | N |
L/I | 0.447 | ambiguous | 0.5154 | ambiguous | -1.275 | Destabilizing | 0.999 | D | 0.845 | deleterious | D | 0.614748314 | None | None | N |
L/K | 0.9931 | likely_pathogenic | 0.9934 | pathogenic | -1.962 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/M | 0.5664 | likely_pathogenic | 0.6059 | pathogenic | -1.164 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
L/N | 0.9951 | likely_pathogenic | 0.9951 | pathogenic | -2.117 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/P | 0.9966 | likely_pathogenic | 0.997 | pathogenic | -1.681 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.667408611 | None | None | N |
L/Q | 0.988 | likely_pathogenic | 0.9885 | pathogenic | -2.186 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/R | 0.9882 | likely_pathogenic | 0.9888 | pathogenic | -1.407 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.65138925 | None | None | N |
L/S | 0.9966 | likely_pathogenic | 0.9969 | pathogenic | -2.776 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/T | 0.9832 | likely_pathogenic | 0.9851 | pathogenic | -2.525 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/V | 0.5817 | likely_pathogenic | 0.6389 | pathogenic | -1.681 | Destabilizing | 0.999 | D | 0.853 | deleterious | D | 0.56610446 | None | None | N |
L/W | 0.9857 | likely_pathogenic | 0.9862 | pathogenic | -2.041 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
L/Y | 0.9865 | likely_pathogenic | 0.9876 | pathogenic | -1.811 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.