Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22122 | 66589;66590;66591 | chr2:178582005;178582004;178582003 | chr2:179446732;179446731;179446730 |
N2AB | 20481 | 61666;61667;61668 | chr2:178582005;178582004;178582003 | chr2:179446732;179446731;179446730 |
N2A | 19554 | 58885;58886;58887 | chr2:178582005;178582004;178582003 | chr2:179446732;179446731;179446730 |
N2B | 13057 | 39394;39395;39396 | chr2:178582005;178582004;178582003 | chr2:179446732;179446731;179446730 |
Novex-1 | 13182 | 39769;39770;39771 | chr2:178582005;178582004;178582003 | chr2:179446732;179446731;179446730 |
Novex-2 | 13249 | 39970;39971;39972 | chr2:178582005;178582004;178582003 | chr2:179446732;179446731;179446730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs764747244 | 0.522 | 0.919 | N | 0.563 | 0.295 | 0.37568098594 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs764747244 | 0.522 | 0.919 | N | 0.563 | 0.295 | 0.37568098594 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs764747244 | 0.522 | 0.919 | N | 0.563 | 0.295 | 0.37568098594 | gnomAD-4.0.0 | 1.0538E-05 | None | None | None | None | N | None | 0 | 5.00334E-05 | None | 0 | 2.23294E-05 | None | 0 | 0 | 1.01737E-05 | 0 | 1.60174E-05 |
E/Q | rs764747244 | None | 0.414 | N | 0.303 | 0.217 | 0.343334270461 | gnomAD-4.0.0 | 6.84386E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73671E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2662 | likely_benign | 0.3353 | benign | -0.416 | Destabilizing | 0.958 | D | 0.587 | neutral | D | 0.52313526 | None | None | N |
E/C | 0.9441 | likely_pathogenic | 0.9677 | pathogenic | 0.014 | Stabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/D | 0.306 | likely_benign | 0.3415 | ambiguous | -0.395 | Destabilizing | 0.958 | D | 0.507 | neutral | N | 0.494209981 | None | None | N |
E/F | 0.9499 | likely_pathogenic | 0.9727 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/G | 0.4977 | ambiguous | 0.6099 | pathogenic | -0.616 | Destabilizing | 0.988 | D | 0.634 | neutral | N | 0.49446347 | None | None | N |
E/H | 0.8415 | likely_pathogenic | 0.8955 | pathogenic | -0.192 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | N |
E/I | 0.6036 | likely_pathogenic | 0.7057 | pathogenic | 0.074 | Stabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/K | 0.4438 | ambiguous | 0.5447 | ambiguous | 0.339 | Stabilizing | 0.919 | D | 0.563 | neutral | N | 0.470318828 | None | None | N |
E/L | 0.7563 | likely_pathogenic | 0.8457 | pathogenic | 0.074 | Stabilizing | 0.991 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/M | 0.7527 | likely_pathogenic | 0.8302 | pathogenic | 0.233 | Stabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
E/N | 0.5716 | likely_pathogenic | 0.6427 | pathogenic | 0.026 | Stabilizing | 0.991 | D | 0.674 | neutral | None | None | None | None | N |
E/P | 0.5566 | ambiguous | 0.6131 | pathogenic | -0.069 | Destabilizing | 0.995 | D | 0.641 | neutral | None | None | None | None | N |
E/Q | 0.3411 | ambiguous | 0.4171 | ambiguous | 0.053 | Stabilizing | 0.414 | N | 0.303 | neutral | N | 0.469420228 | None | None | N |
E/R | 0.6173 | likely_pathogenic | 0.7058 | pathogenic | 0.491 | Stabilizing | 0.982 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/S | 0.4782 | ambiguous | 0.567 | pathogenic | -0.13 | Destabilizing | 0.968 | D | 0.629 | neutral | None | None | None | None | N |
E/T | 0.4792 | ambiguous | 0.5839 | pathogenic | 0.033 | Stabilizing | 0.991 | D | 0.647 | neutral | None | None | None | None | N |
E/V | 0.4199 | ambiguous | 0.5186 | ambiguous | -0.069 | Destabilizing | 0.988 | D | 0.657 | neutral | N | 0.499641257 | None | None | N |
E/W | 0.9838 | likely_pathogenic | 0.991 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/Y | 0.9069 | likely_pathogenic | 0.9462 | pathogenic | -0.098 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.