Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22124 | 66595;66596;66597 | chr2:178581999;178581998;178581997 | chr2:179446726;179446725;179446724 |
N2AB | 20483 | 61672;61673;61674 | chr2:178581999;178581998;178581997 | chr2:179446726;179446725;179446724 |
N2A | 19556 | 58891;58892;58893 | chr2:178581999;178581998;178581997 | chr2:179446726;179446725;179446724 |
N2B | 13059 | 39400;39401;39402 | chr2:178581999;178581998;178581997 | chr2:179446726;179446725;179446724 |
Novex-1 | 13184 | 39775;39776;39777 | chr2:178581999;178581998;178581997 | chr2:179446726;179446725;179446724 |
Novex-2 | 13251 | 39976;39977;39978 | chr2:178581999;178581998;178581997 | chr2:179446726;179446725;179446724 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.002 | N | 0.081 | 0.123 | 0.16115917748 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | rs1449457427 | -0.228 | 0.81 | D | 0.487 | 0.325 | 0.319686207203 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1449457427 | -0.228 | 0.81 | D | 0.487 | 0.325 | 0.319686207203 | gnomAD-4.0.0 | 2.73759E-06 | None | None | None | None | N | None | 0 | 2.23664E-05 | None | 0 | 0 | None | 0 | 0 | 1.79935E-06 | 1.1595E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0785 | likely_benign | 0.0842 | benign | -1.037 | Destabilizing | 0.002 | N | 0.081 | neutral | N | 0.454841116 | None | None | N |
T/C | 0.264 | likely_benign | 0.2774 | benign | -0.546 | Destabilizing | 0.977 | D | 0.461 | neutral | None | None | None | None | N |
T/D | 0.521 | ambiguous | 0.5566 | ambiguous | -0.644 | Destabilizing | 0.617 | D | 0.446 | neutral | None | None | None | None | N |
T/E | 0.4013 | ambiguous | 0.4358 | ambiguous | -0.519 | Destabilizing | 0.447 | N | 0.387 | neutral | None | None | None | None | N |
T/F | 0.2735 | likely_benign | 0.3072 | benign | -0.752 | Destabilizing | 0.92 | D | 0.497 | neutral | None | None | None | None | N |
T/G | 0.2597 | likely_benign | 0.2796 | benign | -1.408 | Destabilizing | 0.25 | N | 0.377 | neutral | None | None | None | None | N |
T/H | 0.2431 | likely_benign | 0.2675 | benign | -1.479 | Destabilizing | 0.977 | D | 0.463 | neutral | None | None | None | None | N |
T/I | 0.166 | likely_benign | 0.1838 | benign | -0.092 | Destabilizing | 0.81 | D | 0.487 | neutral | D | 0.522932977 | None | None | N |
T/K | 0.2318 | likely_benign | 0.2632 | benign | -0.622 | Destabilizing | 0.005 | N | 0.222 | neutral | None | None | None | None | N |
T/L | 0.1074 | likely_benign | 0.1176 | benign | -0.092 | Destabilizing | 0.617 | D | 0.393 | neutral | None | None | None | None | N |
T/M | 0.0896 | likely_benign | 0.0983 | benign | 0.003 | Stabilizing | 0.972 | D | 0.473 | neutral | None | None | None | None | N |
T/N | 0.1218 | likely_benign | 0.1236 | benign | -0.952 | Destabilizing | 0.549 | D | 0.468 | neutral | N | 0.515313571 | None | None | N |
T/P | 0.7056 | likely_pathogenic | 0.7104 | pathogenic | -0.375 | Destabilizing | 0.896 | D | 0.473 | neutral | N | 0.505221708 | None | None | N |
T/Q | 0.2317 | likely_benign | 0.2586 | benign | -0.858 | Destabilizing | 0.739 | D | 0.503 | neutral | None | None | None | None | N |
T/R | 0.1929 | likely_benign | 0.2165 | benign | -0.625 | Destabilizing | 0.447 | N | 0.477 | neutral | None | None | None | None | N |
T/S | 0.1123 | likely_benign | 0.1218 | benign | -1.252 | Destabilizing | 0.02 | N | 0.085 | neutral | N | 0.487798896 | None | None | N |
T/V | 0.122 | likely_benign | 0.1291 | benign | -0.375 | Destabilizing | 0.447 | N | 0.346 | neutral | None | None | None | None | N |
T/W | 0.6129 | likely_pathogenic | 0.6591 | pathogenic | -0.802 | Destabilizing | 0.992 | D | 0.482 | neutral | None | None | None | None | N |
T/Y | 0.2816 | likely_benign | 0.3066 | benign | -0.503 | Destabilizing | 0.972 | D | 0.491 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.