Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22128 | 66607;66608;66609 | chr2:178581987;178581986;178581985 | chr2:179446714;179446713;179446712 |
N2AB | 20487 | 61684;61685;61686 | chr2:178581987;178581986;178581985 | chr2:179446714;179446713;179446712 |
N2A | 19560 | 58903;58904;58905 | chr2:178581987;178581986;178581985 | chr2:179446714;179446713;179446712 |
N2B | 13063 | 39412;39413;39414 | chr2:178581987;178581986;178581985 | chr2:179446714;179446713;179446712 |
Novex-1 | 13188 | 39787;39788;39789 | chr2:178581987;178581986;178581985 | chr2:179446714;179446713;179446712 |
Novex-2 | 13255 | 39988;39989;39990 | chr2:178581987;178581986;178581985 | chr2:179446714;179446713;179446712 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs2047881254 | None | 0.991 | D | 0.745 | 0.483 | 0.651281849334 | gnomAD-4.0.0 | 3.18462E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72053E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9989 | likely_pathogenic | 0.9988 | pathogenic | -3.013 | Highly Destabilizing | 0.953 | D | 0.711 | prob.delet. | None | None | None | None | N |
F/C | 0.9861 | likely_pathogenic | 0.9824 | pathogenic | -1.555 | Destabilizing | 0.999 | D | 0.748 | deleterious | D | 0.554214874 | None | None | N |
F/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.813 | Highly Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
F/E | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.577 | Highly Destabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | N |
F/G | 0.9982 | likely_pathogenic | 0.9983 | pathogenic | -3.461 | Highly Destabilizing | 0.993 | D | 0.773 | deleterious | None | None | None | None | N |
F/H | 0.9964 | likely_pathogenic | 0.9931 | pathogenic | -2.329 | Highly Destabilizing | 0.986 | D | 0.699 | prob.neutral | None | None | None | None | N |
F/I | 0.9795 | likely_pathogenic | 0.9795 | pathogenic | -1.516 | Destabilizing | 0.982 | D | 0.709 | prob.delet. | N | 0.503048299 | None | None | N |
F/K | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -2.38 | Highly Destabilizing | 0.993 | D | 0.792 | deleterious | None | None | None | None | N |
F/L | 0.9968 | likely_pathogenic | 0.9974 | pathogenic | -1.516 | Destabilizing | 0.885 | D | 0.695 | prob.neutral | N | 0.493946946 | None | None | N |
F/M | 0.9872 | likely_pathogenic | 0.9868 | pathogenic | -1.067 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
F/N | 0.9985 | likely_pathogenic | 0.9979 | pathogenic | -3.066 | Highly Destabilizing | 0.993 | D | 0.803 | deleterious | None | None | None | None | N |
F/P | 1.0 | likely_pathogenic | 1.0 | pathogenic | -2.033 | Highly Destabilizing | 0.998 | D | 0.81 | deleterious | None | None | None | None | N |
F/Q | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -2.914 | Highly Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
F/R | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -2.082 | Highly Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | N |
F/S | 0.9988 | likely_pathogenic | 0.9984 | pathogenic | -3.496 | Highly Destabilizing | 0.991 | D | 0.745 | deleterious | D | 0.554214874 | None | None | N |
F/T | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -3.143 | Highly Destabilizing | 0.993 | D | 0.751 | deleterious | None | None | None | None | N |
F/V | 0.9818 | likely_pathogenic | 0.9819 | pathogenic | -2.033 | Highly Destabilizing | 0.939 | D | 0.661 | neutral | N | 0.478837523 | None | None | N |
F/W | 0.9036 | likely_pathogenic | 0.8815 | pathogenic | -0.725 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
F/Y | 0.3455 | ambiguous | 0.3633 | ambiguous | -1.169 | Destabilizing | 0.046 | N | 0.265 | neutral | N | 0.481353327 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.