Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22138 | 66637;66638;66639 | chr2:178581957;178581956;178581955 | chr2:179446684;179446683;179446682 |
N2AB | 20497 | 61714;61715;61716 | chr2:178581957;178581956;178581955 | chr2:179446684;179446683;179446682 |
N2A | 19570 | 58933;58934;58935 | chr2:178581957;178581956;178581955 | chr2:179446684;179446683;179446682 |
N2B | 13073 | 39442;39443;39444 | chr2:178581957;178581956;178581955 | chr2:179446684;179446683;179446682 |
Novex-1 | 13198 | 39817;39818;39819 | chr2:178581957;178581956;178581955 | chr2:179446684;179446683;179446682 |
Novex-2 | 13265 | 40018;40019;40020 | chr2:178581957;178581956;178581955 | chr2:179446684;179446683;179446682 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs759290401 | -0.736 | 0.946 | N | 0.717 | 0.256 | 0.286848849266 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
P/S | rs759290401 | -0.736 | 0.946 | N | 0.717 | 0.256 | 0.286848849266 | gnomAD-4.0.0 | 1.59249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86035E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0638 | likely_benign | 0.0646 | benign | -0.975 | Destabilizing | 0.896 | D | 0.659 | neutral | N | 0.45338996 | None | None | N |
P/C | 0.3357 | likely_benign | 0.343 | ambiguous | -0.7 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
P/D | 0.5828 | likely_pathogenic | 0.5313 | ambiguous | -0.687 | Destabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | N |
P/E | 0.3188 | likely_benign | 0.2749 | benign | -0.775 | Destabilizing | 0.996 | D | 0.741 | deleterious | None | None | None | None | N |
P/F | 0.3001 | likely_benign | 0.2863 | benign | -1.002 | Destabilizing | 0.976 | D | 0.814 | deleterious | None | None | None | None | N |
P/G | 0.3346 | likely_benign | 0.3265 | benign | -1.179 | Destabilizing | 0.996 | D | 0.781 | deleterious | None | None | None | None | N |
P/H | 0.2129 | likely_benign | 0.1777 | benign | -0.685 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
P/I | 0.1444 | likely_benign | 0.1391 | benign | -0.562 | Destabilizing | 0.851 | D | 0.745 | deleterious | None | None | None | None | N |
P/K | 0.3696 | ambiguous | 0.2868 | benign | -0.767 | Destabilizing | 0.988 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/L | 0.0769 | likely_benign | 0.0799 | benign | -0.562 | Destabilizing | 0.011 | N | 0.561 | neutral | N | 0.397998037 | None | None | N |
P/M | 0.167 | likely_benign | 0.1636 | benign | -0.417 | Destabilizing | 0.976 | D | 0.818 | deleterious | None | None | None | None | N |
P/N | 0.3015 | likely_benign | 0.2966 | benign | -0.446 | Destabilizing | 0.996 | D | 0.817 | deleterious | None | None | None | None | N |
P/Q | 0.1576 | likely_benign | 0.1432 | benign | -0.718 | Destabilizing | 0.995 | D | 0.763 | deleterious | N | 0.448002783 | None | None | N |
P/R | 0.2711 | likely_benign | 0.2024 | benign | -0.175 | Destabilizing | 0.984 | D | 0.82 | deleterious | N | 0.461452083 | None | None | N |
P/S | 0.1331 | likely_benign | 0.1301 | benign | -0.877 | Destabilizing | 0.946 | D | 0.717 | prob.delet. | N | 0.452216524 | None | None | N |
P/T | 0.092 | likely_benign | 0.0848 | benign | -0.863 | Destabilizing | 0.946 | D | 0.713 | prob.delet. | N | 0.452851243 | None | None | N |
P/V | 0.1088 | likely_benign | 0.1072 | benign | -0.663 | Destabilizing | 0.851 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/W | 0.5702 | likely_pathogenic | 0.5054 | ambiguous | -1.072 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
P/Y | 0.3533 | ambiguous | 0.3211 | benign | -0.795 | Destabilizing | 0.988 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.