Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22143 | 66652;66653;66654 | chr2:178581942;178581941;178581940 | chr2:179446669;179446668;179446667 |
N2AB | 20502 | 61729;61730;61731 | chr2:178581942;178581941;178581940 | chr2:179446669;179446668;179446667 |
N2A | 19575 | 58948;58949;58950 | chr2:178581942;178581941;178581940 | chr2:179446669;179446668;179446667 |
N2B | 13078 | 39457;39458;39459 | chr2:178581942;178581941;178581940 | chr2:179446669;179446668;179446667 |
Novex-1 | 13203 | 39832;39833;39834 | chr2:178581942;178581941;178581940 | chr2:179446669;179446668;179446667 |
Novex-2 | 13270 | 40033;40034;40035 | chr2:178581942;178581941;178581940 | chr2:179446669;179446668;179446667 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.799 | N | 0.682 | 0.225 | 0.350964488264 | gnomAD-4.0.0 | 6.84453E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99687E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.118 | likely_benign | 0.1248 | benign | -0.372 | Destabilizing | 0.012 | N | 0.515 | neutral | N | 0.457331556 | None | None | N |
D/C | 0.5757 | likely_pathogenic | 0.5742 | pathogenic | 0.032 | Stabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | N |
D/E | 0.0966 | likely_benign | 0.099 | benign | -0.378 | Destabilizing | 0.119 | N | 0.249 | neutral | N | 0.415714219 | None | None | N |
D/F | 0.509 | ambiguous | 0.509 | ambiguous | -0.275 | Destabilizing | 0.974 | D | 0.779 | deleterious | None | None | None | None | N |
D/G | 0.1767 | likely_benign | 0.1847 | benign | -0.591 | Destabilizing | 0.012 | N | 0.451 | neutral | N | 0.49417779 | None | None | N |
D/H | 0.3178 | likely_benign | 0.3072 | benign | -0.246 | Destabilizing | 0.997 | D | 0.668 | prob.neutral | N | 0.475479707 | None | None | N |
D/I | 0.246 | likely_benign | 0.2541 | benign | 0.164 | Stabilizing | 0.949 | D | 0.8 | deleterious | None | None | None | None | N |
D/K | 0.3249 | likely_benign | 0.3146 | benign | 0.24 | Stabilizing | 0.841 | D | 0.625 | neutral | None | None | None | None | N |
D/L | 0.2424 | likely_benign | 0.2567 | benign | 0.164 | Stabilizing | 0.949 | D | 0.627 | neutral | None | None | None | None | N |
D/M | 0.4449 | ambiguous | 0.4594 | ambiguous | 0.384 | Stabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
D/N | 0.1136 | likely_benign | 0.1106 | benign | -0.076 | Destabilizing | 0.799 | D | 0.682 | prob.neutral | N | 0.505952222 | None | None | N |
D/P | 0.3449 | ambiguous | 0.3673 | ambiguous | 0.008 | Stabilizing | 0.974 | D | 0.692 | prob.delet. | None | None | None | None | N |
D/Q | 0.2822 | likely_benign | 0.2893 | benign | -0.043 | Destabilizing | 0.949 | D | 0.668 | prob.neutral | None | None | None | None | N |
D/R | 0.4077 | ambiguous | 0.39 | ambiguous | 0.375 | Stabilizing | 0.949 | D | 0.846 | deleterious | None | None | None | None | N |
D/S | 0.1224 | likely_benign | 0.1255 | benign | -0.196 | Destabilizing | 0.725 | D | 0.553 | neutral | None | None | None | None | N |
D/T | 0.2028 | likely_benign | 0.2086 | benign | -0.024 | Destabilizing | 0.949 | D | 0.615 | neutral | None | None | None | None | N |
D/V | 0.1472 | likely_benign | 0.152 | benign | 0.008 | Stabilizing | 0.875 | D | 0.572 | neutral | N | 0.501373121 | None | None | N |
D/W | 0.8639 | likely_pathogenic | 0.8631 | pathogenic | -0.12 | Destabilizing | 0.998 | D | 0.897 | deleterious | None | None | None | None | N |
D/Y | 0.2416 | likely_benign | 0.2363 | benign | -0.031 | Destabilizing | 0.989 | D | 0.777 | deleterious | N | 0.480341552 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.