Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22145 | 66658;66659;66660 | chr2:178581936;178581935;178581934 | chr2:179446663;179446662;179446661 |
N2AB | 20504 | 61735;61736;61737 | chr2:178581936;178581935;178581934 | chr2:179446663;179446662;179446661 |
N2A | 19577 | 58954;58955;58956 | chr2:178581936;178581935;178581934 | chr2:179446663;179446662;179446661 |
N2B | 13080 | 39463;39464;39465 | chr2:178581936;178581935;178581934 | chr2:179446663;179446662;179446661 |
Novex-1 | 13205 | 39838;39839;39840 | chr2:178581936;178581935;178581934 | chr2:179446663;179446662;179446661 |
Novex-2 | 13272 | 40039;40040;40041 | chr2:178581936;178581935;178581934 | chr2:179446663;179446662;179446661 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.999 | N | 0.839 | 0.461 | 0.36453787251 | gnomAD-4.0.0 | 1.5926E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86043E-06 | 0 | 0 |
S/Y | None | None | 0.999 | N | 0.861 | 0.443 | 0.600100745787 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4806 | ambiguous | 0.5072 | ambiguous | -0.64 | Destabilizing | 0.994 | D | 0.664 | prob.neutral | N | 0.485479659 | None | None | N |
S/C | 0.5192 | ambiguous | 0.5588 | ambiguous | -0.471 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.493686094 | None | None | N |
S/D | 0.9898 | likely_pathogenic | 0.9902 | pathogenic | -0.667 | Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
S/E | 0.9952 | likely_pathogenic | 0.996 | pathogenic | -0.58 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
S/F | 0.9915 | likely_pathogenic | 0.9926 | pathogenic | -0.457 | Destabilizing | 0.999 | D | 0.868 | deleterious | N | 0.506497203 | None | None | N |
S/G | 0.4596 | ambiguous | 0.4733 | ambiguous | -0.985 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
S/H | 0.9914 | likely_pathogenic | 0.9925 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
S/I | 0.9788 | likely_pathogenic | 0.9774 | pathogenic | 0.195 | Stabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
S/K | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -0.67 | Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
S/L | 0.9089 | likely_pathogenic | 0.9174 | pathogenic | 0.195 | Stabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
S/M | 0.9467 | likely_pathogenic | 0.9479 | pathogenic | 0.228 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
S/N | 0.962 | likely_pathogenic | 0.9645 | pathogenic | -0.885 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
S/P | 0.991 | likely_pathogenic | 0.9918 | pathogenic | -0.047 | Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.514005621 | None | None | N |
S/Q | 0.9928 | likely_pathogenic | 0.9937 | pathogenic | -0.836 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
S/R | 0.9985 | likely_pathogenic | 0.9987 | pathogenic | -0.766 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
S/T | 0.2795 | likely_benign | 0.2727 | benign | -0.739 | Destabilizing | 0.997 | D | 0.748 | deleterious | N | 0.51657186 | None | None | N |
S/V | 0.9307 | likely_pathogenic | 0.9284 | pathogenic | -0.047 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
S/W | 0.994 | likely_pathogenic | 0.9949 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
S/Y | 0.9915 | likely_pathogenic | 0.9925 | pathogenic | -0.242 | Destabilizing | 0.999 | D | 0.861 | deleterious | N | 0.513498642 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.