Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22146 | 66661;66662;66663 | chr2:178581933;178581932;178581931 | chr2:179446660;179446659;179446658 |
N2AB | 20505 | 61738;61739;61740 | chr2:178581933;178581932;178581931 | chr2:179446660;179446659;179446658 |
N2A | 19578 | 58957;58958;58959 | chr2:178581933;178581932;178581931 | chr2:179446660;179446659;179446658 |
N2B | 13081 | 39466;39467;39468 | chr2:178581933;178581932;178581931 | chr2:179446660;179446659;179446658 |
Novex-1 | 13206 | 39841;39842;39843 | chr2:178581933;178581932;178581931 | chr2:179446660;179446659;179446658 |
Novex-2 | 13273 | 40042;40043;40044 | chr2:178581933;178581932;178581931 | chr2:179446660;179446659;179446658 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2047865333 | None | 0.688 | N | 0.498 | 0.228 | 0.198526703765 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs2047865333 | None | 0.688 | N | 0.498 | 0.228 | 0.198526703765 | gnomAD-4.0.0 | 6.57333E-06 | None | None | None | None | I | None | 2.4122E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1983 | likely_benign | 0.2196 | benign | 0.036 | Stabilizing | 0.594 | D | 0.456 | neutral | None | None | None | None | I |
K/C | 0.6856 | likely_pathogenic | 0.6915 | pathogenic | -0.364 | Destabilizing | 0.998 | D | 0.502 | neutral | None | None | None | None | I |
K/D | 0.4112 | ambiguous | 0.4375 | ambiguous | -0.138 | Destabilizing | 0.78 | D | 0.456 | neutral | None | None | None | None | I |
K/E | 0.1335 | likely_benign | 0.1496 | benign | -0.145 | Destabilizing | 0.688 | D | 0.498 | neutral | N | 0.395571021 | None | None | I |
K/F | 0.6809 | likely_pathogenic | 0.7135 | pathogenic | -0.264 | Destabilizing | 0.994 | D | 0.509 | neutral | None | None | None | None | I |
K/G | 0.369 | ambiguous | 0.3981 | ambiguous | -0.111 | Destabilizing | 0.745 | D | 0.476 | neutral | None | None | None | None | I |
K/H | 0.3178 | likely_benign | 0.3304 | benign | -0.243 | Destabilizing | 0.981 | D | 0.461 | neutral | None | None | None | None | I |
K/I | 0.2612 | likely_benign | 0.2804 | benign | 0.34 | Stabilizing | 0.981 | D | 0.545 | neutral | None | None | None | None | I |
K/L | 0.2645 | likely_benign | 0.2817 | benign | 0.34 | Stabilizing | 0.935 | D | 0.531 | neutral | None | None | None | None | I |
K/M | 0.2112 | likely_benign | 0.2334 | benign | -0.006 | Destabilizing | 0.998 | D | 0.456 | neutral | N | 0.505605505 | None | None | I |
K/N | 0.3248 | likely_benign | 0.3479 | ambiguous | 0.102 | Stabilizing | 0.067 | N | 0.237 | neutral | N | 0.418274522 | None | None | I |
K/P | 0.3123 | likely_benign | 0.3117 | benign | 0.263 | Stabilizing | 0.981 | D | 0.512 | neutral | None | None | None | None | I |
K/Q | 0.1234 | likely_benign | 0.1297 | benign | -0.044 | Destabilizing | 0.915 | D | 0.522 | neutral | N | 0.444653047 | None | None | I |
K/R | 0.09 | likely_benign | 0.0916 | benign | -0.058 | Destabilizing | 0.915 | D | 0.483 | neutral | N | 0.44430633 | None | None | I |
K/S | 0.2851 | likely_benign | 0.3139 | benign | -0.297 | Destabilizing | 0.104 | N | 0.144 | neutral | None | None | None | None | I |
K/T | 0.1344 | likely_benign | 0.1531 | benign | -0.178 | Destabilizing | 0.728 | D | 0.421 | neutral | N | 0.415906221 | None | None | I |
K/V | 0.2042 | likely_benign | 0.2195 | benign | 0.263 | Stabilizing | 0.935 | D | 0.534 | neutral | None | None | None | None | I |
K/W | 0.7826 | likely_pathogenic | 0.7984 | pathogenic | -0.348 | Destabilizing | 0.998 | D | 0.592 | neutral | None | None | None | None | I |
K/Y | 0.6011 | likely_pathogenic | 0.6199 | pathogenic | 0.009 | Stabilizing | 0.994 | D | 0.559 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.