Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22147 | 66664;66665;66666 | chr2:178581930;178581929;178581928 | chr2:179446657;179446656;179446655 |
N2AB | 20506 | 61741;61742;61743 | chr2:178581930;178581929;178581928 | chr2:179446657;179446656;179446655 |
N2A | 19579 | 58960;58961;58962 | chr2:178581930;178581929;178581928 | chr2:179446657;179446656;179446655 |
N2B | 13082 | 39469;39470;39471 | chr2:178581930;178581929;178581928 | chr2:179446657;179446656;179446655 |
Novex-1 | 13207 | 39844;39845;39846 | chr2:178581930;178581929;178581928 | chr2:179446657;179446656;179446655 |
Novex-2 | 13274 | 40045;40046;40047 | chr2:178581930;178581929;178581928 | chr2:179446657;179446656;179446655 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | rs773148853 | -0.43 | 0.128 | N | 0.433 | 0.278 | 0.377451072189 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
A/P | rs773148853 | -0.43 | 0.128 | N | 0.433 | 0.278 | 0.377451072189 | gnomAD-4.0.0 | 1.59268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5793 | likely_pathogenic | 0.6075 | pathogenic | -0.707 | Destabilizing | 1.0 | D | 0.659 | prob.neutral | None | None | None | None | N |
A/D | 0.6531 | likely_pathogenic | 0.6996 | pathogenic | -0.894 | Destabilizing | 0.993 | D | 0.782 | deleterious | N | 0.484434881 | None | None | N |
A/E | 0.4756 | ambiguous | 0.5115 | ambiguous | -0.993 | Destabilizing | 0.995 | D | 0.65 | prob.neutral | None | None | None | None | N |
A/F | 0.5388 | ambiguous | 0.5702 | pathogenic | -0.943 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
A/G | 0.1424 | likely_benign | 0.1667 | benign | -0.816 | Destabilizing | 0.06 | N | 0.313 | neutral | N | 0.506734161 | None | None | N |
A/H | 0.6648 | likely_pathogenic | 0.6923 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
A/I | 0.4455 | ambiguous | 0.4468 | ambiguous | -0.389 | Destabilizing | 0.998 | D | 0.738 | deleterious | None | None | None | None | N |
A/K | 0.6198 | likely_pathogenic | 0.6776 | pathogenic | -1.027 | Destabilizing | 0.995 | D | 0.653 | prob.neutral | None | None | None | None | N |
A/L | 0.3486 | ambiguous | 0.3694 | ambiguous | -0.389 | Destabilizing | 0.995 | D | 0.665 | prob.neutral | None | None | None | None | N |
A/M | 0.4117 | ambiguous | 0.4215 | ambiguous | -0.346 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
A/N | 0.4907 | ambiguous | 0.5153 | ambiguous | -0.62 | Destabilizing | 0.995 | D | 0.809 | deleterious | None | None | None | None | N |
A/P | 0.115 | likely_benign | 0.1127 | benign | -0.438 | Destabilizing | 0.128 | N | 0.433 | neutral | N | 0.42921474 | None | None | N |
A/Q | 0.4951 | ambiguous | 0.5231 | ambiguous | -0.876 | Destabilizing | 0.998 | D | 0.721 | deleterious | None | None | None | None | N |
A/R | 0.5921 | likely_pathogenic | 0.6466 | pathogenic | -0.527 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
A/S | 0.1415 | likely_benign | 0.1429 | benign | -0.877 | Destabilizing | 0.953 | D | 0.483 | neutral | N | 0.481566357 | None | None | N |
A/T | 0.1823 | likely_benign | 0.1891 | benign | -0.896 | Destabilizing | 0.993 | D | 0.626 | neutral | N | 0.498978682 | None | None | N |
A/V | 0.2465 | likely_benign | 0.2518 | benign | -0.438 | Destabilizing | 0.976 | D | 0.605 | neutral | N | 0.492322069 | None | None | N |
A/W | 0.8478 | likely_pathogenic | 0.8731 | pathogenic | -1.163 | Destabilizing | 1.0 | D | 0.737 | deleterious | None | None | None | None | N |
A/Y | 0.6378 | likely_pathogenic | 0.6643 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.