Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2215 | 6868;6869;6870 | chr2:178775068;178775067;178775066 | chr2:179639795;179639794;179639793 |
N2AB | 2215 | 6868;6869;6870 | chr2:178775068;178775067;178775066 | chr2:179639795;179639794;179639793 |
N2A | 2215 | 6868;6869;6870 | chr2:178775068;178775067;178775066 | chr2:179639795;179639794;179639793 |
N2B | 2169 | 6730;6731;6732 | chr2:178775068;178775067;178775066 | chr2:179639795;179639794;179639793 |
Novex-1 | 2169 | 6730;6731;6732 | chr2:178775068;178775067;178775066 | chr2:179639795;179639794;179639793 |
Novex-2 | 2169 | 6730;6731;6732 | chr2:178775068;178775067;178775066 | chr2:179639795;179639794;179639793 |
Novex-3 | 2215 | 6868;6869;6870 | chr2:178775068;178775067;178775066 | chr2:179639795;179639794;179639793 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs778552915 | 0.106 | 0.096 | N | 0.28 | 0.123 | 0.200317383148 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.45E-05 | None | 0 | None | 0 | 0 | 0 |
H/R | rs778552915 | 0.106 | 0.096 | N | 0.28 | 0.123 | 0.200317383148 | gnomAD-4.0.0 | 1.59074E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77562E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1241 | likely_benign | 0.115 | benign | 0.466 | Stabilizing | 0.025 | N | 0.264 | neutral | None | None | None | None | N |
H/C | 0.1045 | likely_benign | 0.0993 | benign | 0.617 | Stabilizing | 0.958 | D | 0.295 | neutral | None | None | None | None | N |
H/D | 0.138 | likely_benign | 0.1264 | benign | -0.282 | Destabilizing | 0.042 | N | 0.325 | neutral | N | 0.491716332 | None | None | N |
H/E | 0.1425 | likely_benign | 0.1309 | benign | -0.269 | Destabilizing | None | N | 0.133 | neutral | None | None | None | None | N |
H/F | 0.1318 | likely_benign | 0.128 | benign | 1.037 | Stabilizing | None | N | 0.113 | neutral | None | None | None | None | N |
H/G | 0.1524 | likely_benign | 0.1444 | benign | 0.238 | Stabilizing | 0.055 | N | 0.339 | neutral | None | None | None | None | N |
H/I | 0.1368 | likely_benign | 0.1289 | benign | 1.033 | Stabilizing | 0.22 | N | 0.429 | neutral | None | None | None | None | N |
H/K | 0.1077 | likely_benign | 0.1037 | benign | 0.378 | Stabilizing | 0.055 | N | 0.323 | neutral | None | None | None | None | N |
H/L | 0.0755 | likely_benign | 0.0732 | benign | 1.033 | Stabilizing | 0.042 | N | 0.285 | neutral | N | 0.484833154 | None | None | N |
H/M | 0.2271 | likely_benign | 0.2112 | benign | 0.649 | Stabilizing | 0.667 | D | 0.329 | neutral | None | None | None | None | N |
H/N | 0.0851 | likely_benign | 0.0815 | benign | 0.199 | Stabilizing | 0.042 | N | 0.273 | neutral | N | 0.503467543 | None | None | N |
H/P | 0.1114 | likely_benign | 0.1075 | benign | 0.867 | Stabilizing | 0.301 | N | 0.391 | neutral | N | 0.477807057 | None | None | N |
H/Q | 0.0934 | likely_benign | 0.0857 | benign | 0.278 | Stabilizing | 0.003 | N | 0.217 | neutral | N | 0.443189759 | None | None | N |
H/R | 0.064 | likely_benign | 0.06 | benign | -0.144 | Destabilizing | 0.096 | N | 0.28 | neutral | N | 0.451898078 | None | None | N |
H/S | 0.1088 | likely_benign | 0.1057 | benign | 0.371 | Stabilizing | 0.002 | N | 0.145 | neutral | None | None | None | None | N |
H/T | 0.1127 | likely_benign | 0.1022 | benign | 0.477 | Stabilizing | 0.055 | N | 0.342 | neutral | None | None | None | None | N |
H/V | 0.1195 | likely_benign | 0.1114 | benign | 0.867 | Stabilizing | 0.104 | N | 0.363 | neutral | None | None | None | None | N |
H/W | 0.2062 | likely_benign | 0.2001 | benign | 0.928 | Stabilizing | 0.667 | D | 0.311 | neutral | None | None | None | None | N |
H/Y | 0.0736 | likely_benign | 0.0695 | benign | 1.178 | Stabilizing | None | N | 0.136 | neutral | N | 0.50932901 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.