Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22152 | 66679;66680;66681 | chr2:178581915;178581914;178581913 | chr2:179446642;179446641;179446640 |
N2AB | 20511 | 61756;61757;61758 | chr2:178581915;178581914;178581913 | chr2:179446642;179446641;179446640 |
N2A | 19584 | 58975;58976;58977 | chr2:178581915;178581914;178581913 | chr2:179446642;179446641;179446640 |
N2B | 13087 | 39484;39485;39486 | chr2:178581915;178581914;178581913 | chr2:179446642;179446641;179446640 |
Novex-1 | 13212 | 39859;39860;39861 | chr2:178581915;178581914;178581913 | chr2:179446642;179446641;179446640 |
Novex-2 | 13279 | 40060;40061;40062 | chr2:178581915;178581914;178581913 | chr2:179446642;179446641;179446640 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.999 | N | 0.505 | 0.189 | 0.254244900254 | gnomAD-4.0.0 | 1.59298E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8943 | likely_pathogenic | 0.9229 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.51301148 | None | None | N |
D/C | 0.9814 | likely_pathogenic | 0.9899 | pathogenic | -0.025 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
D/E | 0.7199 | likely_pathogenic | 0.7693 | pathogenic | -0.218 | Destabilizing | 0.999 | D | 0.505 | neutral | N | 0.465142962 | None | None | N |
D/F | 0.9754 | likely_pathogenic | 0.9808 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
D/G | 0.945 | likely_pathogenic | 0.9607 | pathogenic | -0.298 | Destabilizing | 1.0 | D | 0.826 | deleterious | N | 0.517302579 | None | None | N |
D/H | 0.9331 | likely_pathogenic | 0.9578 | pathogenic | 0.151 | Stabilizing | 1.0 | D | 0.898 | deleterious | N | 0.461348243 | None | None | N |
D/I | 0.9421 | likely_pathogenic | 0.9613 | pathogenic | 0.233 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
D/K | 0.9689 | likely_pathogenic | 0.9778 | pathogenic | 0.317 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
D/L | 0.9248 | likely_pathogenic | 0.944 | pathogenic | 0.233 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
D/M | 0.9834 | likely_pathogenic | 0.9877 | pathogenic | 0.207 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
D/N | 0.636 | likely_pathogenic | 0.6969 | pathogenic | 0.126 | Stabilizing | 1.0 | D | 0.824 | deleterious | N | 0.513704913 | None | None | N |
D/P | 0.971 | likely_pathogenic | 0.9758 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
D/Q | 0.958 | likely_pathogenic | 0.971 | pathogenic | 0.14 | Stabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
D/R | 0.9761 | likely_pathogenic | 0.9831 | pathogenic | 0.51 | Stabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
D/S | 0.8054 | likely_pathogenic | 0.8515 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
D/T | 0.9456 | likely_pathogenic | 0.9592 | pathogenic | 0.124 | Stabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
D/V | 0.894 | likely_pathogenic | 0.9271 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.827 | deleterious | N | 0.473905863 | None | None | N |
D/W | 0.9951 | likely_pathogenic | 0.9957 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
D/Y | 0.8403 | likely_pathogenic | 0.8821 | pathogenic | 0.066 | Stabilizing | 1.0 | D | 0.835 | deleterious | N | 0.488998378 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.