Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22156 | 66691;66692;66693 | chr2:178581802;178581801;178581800 | chr2:179446529;179446528;179446527 |
N2AB | 20515 | 61768;61769;61770 | chr2:178581802;178581801;178581800 | chr2:179446529;179446528;179446527 |
N2A | 19588 | 58987;58988;58989 | chr2:178581802;178581801;178581800 | chr2:179446529;179446528;179446527 |
N2B | 13091 | 39496;39497;39498 | chr2:178581802;178581801;178581800 | chr2:179446529;179446528;179446527 |
Novex-1 | 13216 | 39871;39872;39873 | chr2:178581802;178581801;178581800 | chr2:179446529;179446528;179446527 |
Novex-2 | 13283 | 40072;40073;40074 | chr2:178581802;178581801;178581800 | chr2:179446529;179446528;179446527 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.849 | 0.327 | 0.384086055536 | gnomAD-4.0.0 | 6.93322E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.2012E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1846 | likely_benign | 0.196 | benign | -0.682 | Destabilizing | 0.999 | D | 0.825 | deleterious | N | 0.473221073 | None | None | I |
P/C | 0.7146 | likely_pathogenic | 0.7314 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
P/D | 0.9462 | likely_pathogenic | 0.956 | pathogenic | -0.114 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
P/E | 0.6838 | likely_pathogenic | 0.6871 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
P/F | 0.8528 | likely_pathogenic | 0.8629 | pathogenic | -0.848 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
P/G | 0.8268 | likely_pathogenic | 0.8494 | pathogenic | -0.829 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
P/H | 0.5691 | likely_pathogenic | 0.6027 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.864 | deleterious | N | 0.508814608 | None | None | I |
P/I | 0.3713 | ambiguous | 0.397 | ambiguous | -0.44 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
P/K | 0.4506 | ambiguous | 0.4573 | ambiguous | -0.396 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
P/L | 0.2164 | likely_benign | 0.2394 | benign | -0.44 | Destabilizing | 1.0 | D | 0.83 | deleterious | N | 0.467539988 | None | None | I |
P/M | 0.5377 | ambiguous | 0.5545 | ambiguous | -0.362 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
P/N | 0.8584 | likely_pathogenic | 0.8772 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
P/Q | 0.3725 | ambiguous | 0.3868 | ambiguous | -0.419 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
P/R | 0.3097 | likely_benign | 0.3373 | benign | 0.119 | Stabilizing | 1.0 | D | 0.858 | deleterious | N | 0.4780866 | None | None | I |
P/S | 0.4796 | ambiguous | 0.5143 | ambiguous | -0.622 | Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.479567857 | None | None | I |
P/T | 0.279 | likely_benign | 0.3103 | benign | -0.622 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.507293671 | None | None | I |
P/V | 0.2593 | likely_benign | 0.2885 | benign | -0.485 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
P/W | 0.9457 | likely_pathogenic | 0.9541 | pathogenic | -0.876 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
P/Y | 0.846 | likely_pathogenic | 0.8651 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.