Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22159 | 66700;66701;66702 | chr2:178581793;178581792;178581791 | chr2:179446520;179446519;179446518 |
N2AB | 20518 | 61777;61778;61779 | chr2:178581793;178581792;178581791 | chr2:179446520;179446519;179446518 |
N2A | 19591 | 58996;58997;58998 | chr2:178581793;178581792;178581791 | chr2:179446520;179446519;179446518 |
N2B | 13094 | 39505;39506;39507 | chr2:178581793;178581792;178581791 | chr2:179446520;179446519;179446518 |
Novex-1 | 13219 | 39880;39881;39882 | chr2:178581793;178581792;178581791 | chr2:179446520;179446519;179446518 |
Novex-2 | 13286 | 40081;40082;40083 | chr2:178581793;178581792;178581791 | chr2:179446520;179446519;179446518 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1471770452 | -1.325 | 1.0 | N | 0.843 | 0.41 | 0.361160317528 | gnomAD-2.1.1 | 4.43E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.82E-06 | 0 |
P/S | rs1471770452 | -1.325 | 1.0 | N | 0.843 | 0.41 | 0.361160317528 | gnomAD-4.0.0 | 3.27065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9244E-06 | 0 | 3.09521E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1854 | likely_benign | 0.194 | benign | -1.181 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.50060233 | None | None | N |
P/C | 0.7811 | likely_pathogenic | 0.8146 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
P/D | 0.9518 | likely_pathogenic | 0.97 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
P/E | 0.8161 | likely_pathogenic | 0.8587 | pathogenic | -1.613 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
P/F | 0.8909 | likely_pathogenic | 0.9175 | pathogenic | -1.359 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
P/G | 0.7754 | likely_pathogenic | 0.8288 | pathogenic | -1.383 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
P/H | 0.6827 | likely_pathogenic | 0.757 | pathogenic | -0.886 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/I | 0.7478 | likely_pathogenic | 0.7917 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
P/K | 0.7684 | likely_pathogenic | 0.8279 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/L | 0.4905 | ambiguous | 0.581 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.531547807 | None | None | N |
P/M | 0.7019 | likely_pathogenic | 0.7505 | pathogenic | -0.521 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
P/N | 0.8602 | likely_pathogenic | 0.8998 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
P/Q | 0.5382 | ambiguous | 0.6258 | pathogenic | -0.993 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.501629493 | None | None | N |
P/R | 0.628 | likely_pathogenic | 0.7185 | pathogenic | -0.23 | Destabilizing | 1.0 | D | 0.898 | deleterious | N | 0.509542759 | None | None | N |
P/S | 0.4205 | ambiguous | 0.4921 | ambiguous | -1.028 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.479486314 | None | None | N |
P/T | 0.5072 | ambiguous | 0.5784 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.512936573 | None | None | N |
P/V | 0.6053 | likely_pathogenic | 0.658 | pathogenic | -0.863 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/W | 0.9651 | likely_pathogenic | 0.9762 | pathogenic | -1.432 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
P/Y | 0.9051 | likely_pathogenic | 0.9305 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.