Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22161 | 66706;66707;66708 | chr2:178581787;178581786;178581785 | chr2:179446514;179446513;179446512 |
N2AB | 20520 | 61783;61784;61785 | chr2:178581787;178581786;178581785 | chr2:179446514;179446513;179446512 |
N2A | 19593 | 59002;59003;59004 | chr2:178581787;178581786;178581785 | chr2:179446514;179446513;179446512 |
N2B | 13096 | 39511;39512;39513 | chr2:178581787;178581786;178581785 | chr2:179446514;179446513;179446512 |
Novex-1 | 13221 | 39886;39887;39888 | chr2:178581787;178581786;178581785 | chr2:179446514;179446513;179446512 |
Novex-2 | 13288 | 40087;40088;40089 | chr2:178581787;178581786;178581785 | chr2:179446514;179446513;179446512 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs886038883 | None | 0.056 | N | 0.273 | 0.184 | 0.115124310173 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5167 | ambiguous | 0.5258 | ambiguous | -0.678 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
A/D | 0.8515 | likely_pathogenic | 0.876 | pathogenic | -0.943 | Destabilizing | 0.967 | D | 0.781 | deleterious | N | 0.428995735 | None | None | N |
A/E | 0.8095 | likely_pathogenic | 0.8364 | pathogenic | -0.98 | Destabilizing | 0.975 | D | 0.686 | prob.neutral | None | None | None | None | N |
A/F | 0.6774 | likely_pathogenic | 0.6715 | pathogenic | -0.832 | Destabilizing | 0.987 | D | 0.808 | deleterious | None | None | None | None | N |
A/G | 0.2729 | likely_benign | 0.2627 | benign | -0.942 | Destabilizing | 0.025 | N | 0.261 | neutral | N | 0.372216945 | None | None | N |
A/H | 0.8086 | likely_pathogenic | 0.8223 | pathogenic | -1.163 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
A/I | 0.4965 | ambiguous | 0.4643 | ambiguous | -0.213 | Destabilizing | 0.975 | D | 0.752 | deleterious | None | None | None | None | N |
A/K | 0.9099 | likely_pathogenic | 0.9203 | pathogenic | -1.099 | Destabilizing | 0.975 | D | 0.713 | prob.delet. | None | None | None | None | N |
A/L | 0.3977 | ambiguous | 0.3819 | ambiguous | -0.213 | Destabilizing | 0.845 | D | 0.641 | neutral | None | None | None | None | N |
A/M | 0.5223 | ambiguous | 0.486 | ambiguous | -0.203 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/N | 0.5763 | likely_pathogenic | 0.5494 | ambiguous | -0.778 | Destabilizing | 0.975 | D | 0.797 | deleterious | None | None | None | None | N |
A/P | 0.6702 | likely_pathogenic | 0.7026 | pathogenic | -0.335 | Destabilizing | 0.983 | D | 0.754 | deleterious | N | 0.474613381 | None | None | N |
A/Q | 0.6713 | likely_pathogenic | 0.6836 | pathogenic | -0.921 | Destabilizing | 0.987 | D | 0.769 | deleterious | None | None | None | None | N |
A/R | 0.8043 | likely_pathogenic | 0.8436 | pathogenic | -0.764 | Destabilizing | 0.975 | D | 0.756 | deleterious | None | None | None | None | N |
A/S | 0.1349 | likely_benign | 0.1256 | benign | -1.084 | Destabilizing | 0.805 | D | 0.485 | neutral | N | 0.39549645 | None | None | N |
A/T | 0.2081 | likely_benign | 0.1901 | benign | -1.028 | Destabilizing | 0.056 | N | 0.273 | neutral | N | 0.405462727 | None | None | N |
A/V | 0.2785 | likely_benign | 0.2675 | benign | -0.335 | Destabilizing | 0.805 | D | 0.533 | neutral | N | 0.411218051 | None | None | N |
A/W | 0.931 | likely_pathogenic | 0.9437 | pathogenic | -1.198 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
A/Y | 0.7629 | likely_pathogenic | 0.7703 | pathogenic | -0.783 | Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.