Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22163 | 66712;66713;66714 | chr2:178581781;178581780;178581779 | chr2:179446508;179446507;179446506 |
N2AB | 20522 | 61789;61790;61791 | chr2:178581781;178581780;178581779 | chr2:179446508;179446507;179446506 |
N2A | 19595 | 59008;59009;59010 | chr2:178581781;178581780;178581779 | chr2:179446508;179446507;179446506 |
N2B | 13098 | 39517;39518;39519 | chr2:178581781;178581780;178581779 | chr2:179446508;179446507;179446506 |
Novex-1 | 13223 | 39892;39893;39894 | chr2:178581781;178581780;178581779 | chr2:179446508;179446507;179446506 |
Novex-2 | 13290 | 40093;40094;40095 | chr2:178581781;178581780;178581779 | chr2:179446508;179446507;179446506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs752183879 | 0.077 | 0.976 | N | 0.806 | 0.368 | 0.462022758384 | gnomAD-2.1.1 | 4.38E-06 | None | None | None | None | N | None | 0 | 3.21E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs752183879 | 0.077 | 0.976 | N | 0.806 | 0.368 | 0.462022758384 | gnomAD-4.0.0 | 6.5072E-06 | None | None | None | None | N | None | 5.8418E-05 | 4.83349E-05 | None | 0 | 0 | None | 0 | 0 | 2.91566E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6949 | likely_pathogenic | 0.74 | pathogenic | -1.897 | Destabilizing | 0.958 | D | 0.739 | prob.delet. | N | 0.494993221 | None | None | N |
P/C | 0.9412 | likely_pathogenic | 0.9566 | pathogenic | -1.509 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
P/D | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -2.561 | Highly Destabilizing | 0.998 | D | 0.79 | deleterious | None | None | None | None | N |
P/E | 0.9977 | likely_pathogenic | 0.9985 | pathogenic | -2.374 | Highly Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
P/F | 0.9948 | likely_pathogenic | 0.9956 | pathogenic | -1.079 | Destabilizing | 0.334 | N | 0.662 | neutral | None | None | None | None | N |
P/G | 0.9783 | likely_pathogenic | 0.9846 | pathogenic | -2.397 | Highly Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
P/H | 0.9949 | likely_pathogenic | 0.9965 | pathogenic | -2.264 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | D | 0.543571995 | None | None | N |
P/I | 0.9031 | likely_pathogenic | 0.9248 | pathogenic | -0.519 | Destabilizing | 0.982 | D | 0.849 | deleterious | None | None | None | None | N |
P/K | 0.9981 | likely_pathogenic | 0.9987 | pathogenic | -1.57 | Destabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | N |
P/L | 0.7608 | likely_pathogenic | 0.7987 | pathogenic | -0.519 | Destabilizing | 0.976 | D | 0.806 | deleterious | N | 0.498305813 | None | None | N |
P/M | 0.9673 | likely_pathogenic | 0.9728 | pathogenic | -0.652 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
P/N | 0.9981 | likely_pathogenic | 0.9987 | pathogenic | -1.794 | Destabilizing | 0.998 | D | 0.848 | deleterious | None | None | None | None | N |
P/Q | 0.991 | likely_pathogenic | 0.994 | pathogenic | -1.673 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
P/R | 0.9927 | likely_pathogenic | 0.9953 | pathogenic | -1.427 | Destabilizing | 0.998 | D | 0.855 | deleterious | D | 0.543571995 | None | None | N |
P/S | 0.9646 | likely_pathogenic | 0.9748 | pathogenic | -2.357 | Highly Destabilizing | 0.994 | D | 0.784 | deleterious | D | 0.531797616 | None | None | N |
P/T | 0.9207 | likely_pathogenic | 0.9382 | pathogenic | -2.04 | Highly Destabilizing | 0.994 | D | 0.796 | deleterious | D | 0.543065016 | None | None | N |
P/V | 0.7778 | likely_pathogenic | 0.8243 | pathogenic | -0.95 | Destabilizing | 0.991 | D | 0.81 | deleterious | None | None | None | None | N |
P/W | 0.9987 | likely_pathogenic | 0.9991 | pathogenic | -1.621 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/Y | 0.9981 | likely_pathogenic | 0.9988 | pathogenic | -1.238 | Destabilizing | 0.982 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.