Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22170 | 66733;66734;66735 | chr2:178581760;178581759;178581758 | chr2:179446487;179446486;179446485 |
N2AB | 20529 | 61810;61811;61812 | chr2:178581760;178581759;178581758 | chr2:179446487;179446486;179446485 |
N2A | 19602 | 59029;59030;59031 | chr2:178581760;178581759;178581758 | chr2:179446487;179446486;179446485 |
N2B | 13105 | 39538;39539;39540 | chr2:178581760;178581759;178581758 | chr2:179446487;179446486;179446485 |
Novex-1 | 13230 | 39913;39914;39915 | chr2:178581760;178581759;178581758 | chr2:179446487;179446486;179446485 |
Novex-2 | 13297 | 40114;40115;40116 | chr2:178581760;178581759;178581758 | chr2:179446487;179446486;179446485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs377642110 | -0.491 | 0.995 | N | 0.438 | 0.271 | None | gnomAD-2.1.1 | 1.28E-05 | None | None | None | None | N | None | 2.08855E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/C | rs377642110 | -0.491 | 0.995 | N | 0.438 | 0.271 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/C | rs377642110 | -0.491 | 0.995 | N | 0.438 | 0.271 | None | gnomAD-4.0.0 | 8.09714E-06 | None | None | None | None | N | None | 6.69344E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.9547E-06 | 0 | 1.60999E-05 |
R/G | None | None | 0.549 | N | 0.429 | 0.164 | 0.359557344763 | gnomAD-4.0.0 | 6.88022E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.55637E-05 | None | 0 | 0 | 0 | 0 | 0 |
R/H | rs190711640 | -1.148 | 0.008 | N | 0.108 | 0.06 | None | gnomAD-2.1.1 | 4.26E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.48E-06 | 0 |
R/H | rs190711640 | -1.148 | 0.008 | N | 0.108 | 0.06 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94175E-04 | None | 0 | 0 | 0 | 0 | 0 |
R/H | rs190711640 | -1.148 | 0.008 | N | 0.108 | 0.06 | None | gnomAD-4.0.0 | 7.47543E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.2603E-05 | None | 0 | 0 | 8.50781E-06 | 0 | 1.60953E-05 |
R/L | rs190711640 | None | 0.549 | N | 0.403 | 0.135 | 0.317084106153 | gnomAD-4.0.0 | 7.5697E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03E-06 | 0 | 1.66606E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5294 | ambiguous | 0.5474 | ambiguous | -0.201 | Destabilizing | 0.116 | N | 0.384 | neutral | None | None | None | None | N |
R/C | 0.2014 | likely_benign | 0.2285 | benign | -0.162 | Destabilizing | 0.995 | D | 0.438 | neutral | N | 0.48297858 | None | None | N |
R/D | 0.8369 | likely_pathogenic | 0.8512 | pathogenic | -0.119 | Destabilizing | 0.388 | N | 0.417 | neutral | None | None | None | None | N |
R/E | 0.6224 | likely_pathogenic | 0.6399 | pathogenic | -0.065 | Destabilizing | 0.116 | N | 0.324 | neutral | None | None | None | None | N |
R/F | 0.7517 | likely_pathogenic | 0.7958 | pathogenic | -0.456 | Destabilizing | 0.69 | D | 0.451 | neutral | None | None | None | None | N |
R/G | 0.4124 | ambiguous | 0.4289 | ambiguous | -0.4 | Destabilizing | 0.549 | D | 0.429 | neutral | N | 0.474034591 | None | None | N |
R/H | 0.1054 | likely_benign | 0.1279 | benign | -0.853 | Destabilizing | 0.008 | N | 0.108 | neutral | N | 0.474266665 | None | None | N |
R/I | 0.585 | likely_pathogenic | 0.5894 | pathogenic | 0.29 | Stabilizing | 0.818 | D | 0.454 | neutral | None | None | None | None | N |
R/K | 0.1183 | likely_benign | 0.1233 | benign | -0.187 | Destabilizing | 0.001 | N | 0.103 | neutral | None | None | None | None | N |
R/L | 0.439 | ambiguous | 0.4622 | ambiguous | 0.29 | Stabilizing | 0.549 | D | 0.403 | neutral | N | 0.467240955 | None | None | N |
R/M | 0.5572 | ambiguous | 0.562 | ambiguous | 0.074 | Stabilizing | 0.932 | D | 0.387 | neutral | None | None | None | None | N |
R/N | 0.655 | likely_pathogenic | 0.6949 | pathogenic | 0.222 | Stabilizing | 0.241 | N | 0.287 | neutral | None | None | None | None | N |
R/P | 0.725 | likely_pathogenic | 0.7272 | pathogenic | 0.147 | Stabilizing | 0.896 | D | 0.421 | neutral | N | 0.453947321 | None | None | N |
R/Q | 0.1571 | likely_benign | 0.1671 | benign | 0.004 | Stabilizing | 0.388 | N | 0.372 | neutral | None | None | None | None | N |
R/S | 0.6182 | likely_pathogenic | 0.643 | pathogenic | -0.252 | Destabilizing | 0.549 | D | 0.37 | neutral | N | 0.396744457 | None | None | N |
R/T | 0.5075 | ambiguous | 0.5193 | ambiguous | -0.065 | Destabilizing | 0.388 | N | 0.379 | neutral | None | None | None | None | N |
R/V | 0.6175 | likely_pathogenic | 0.635 | pathogenic | 0.147 | Stabilizing | 0.69 | D | 0.433 | neutral | None | None | None | None | N |
R/W | 0.4212 | ambiguous | 0.4533 | ambiguous | -0.418 | Destabilizing | 0.981 | D | 0.507 | neutral | None | None | None | None | N |
R/Y | 0.5208 | ambiguous | 0.5903 | pathogenic | -0.02 | Destabilizing | 0.527 | D | 0.417 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.