Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22173 | 66742;66743;66744 | chr2:178581751;178581750;178581749 | chr2:179446478;179446477;179446476 |
N2AB | 20532 | 61819;61820;61821 | chr2:178581751;178581750;178581749 | chr2:179446478;179446477;179446476 |
N2A | 19605 | 59038;59039;59040 | chr2:178581751;178581750;178581749 | chr2:179446478;179446477;179446476 |
N2B | 13108 | 39547;39548;39549 | chr2:178581751;178581750;178581749 | chr2:179446478;179446477;179446476 |
Novex-1 | 13233 | 39922;39923;39924 | chr2:178581751;178581750;178581749 | chr2:179446478;179446477;179446476 |
Novex-2 | 13300 | 40123;40124;40125 | chr2:178581751;178581750;178581749 | chr2:179446478;179446477;179446476 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs746199327 | -2.496 | 0.656 | N | 0.632 | 0.311 | 0.507748507896 | gnomAD-2.1.1 | 4.2E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.34E-06 | 0 |
V/A | rs746199327 | -2.496 | 0.656 | N | 0.632 | 0.311 | 0.507748507896 | gnomAD-4.0.0 | 1.60731E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88452E-06 | 0 | 0 |
V/L | rs1347199587 | -0.343 | 0.125 | N | 0.382 | 0.096 | 0.239901079897 | gnomAD-2.1.1 | 4.21E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.36E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6093 | likely_pathogenic | 0.5918 | pathogenic | -2.257 | Highly Destabilizing | 0.656 | D | 0.632 | neutral | N | 0.504264285 | None | None | N |
V/C | 0.8741 | likely_pathogenic | 0.8677 | pathogenic | -2.526 | Highly Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
V/D | 0.9954 | likely_pathogenic | 0.9952 | pathogenic | -3.173 | Highly Destabilizing | 0.993 | D | 0.871 | deleterious | None | None | None | None | N |
V/E | 0.9866 | likely_pathogenic | 0.9871 | pathogenic | -2.898 | Highly Destabilizing | 0.99 | D | 0.862 | deleterious | D | 0.529625704 | None | None | N |
V/F | 0.7155 | likely_pathogenic | 0.6968 | pathogenic | -1.329 | Destabilizing | 0.956 | D | 0.837 | deleterious | None | None | None | None | N |
V/G | 0.8979 | likely_pathogenic | 0.8922 | pathogenic | -2.837 | Highly Destabilizing | 0.97 | D | 0.87 | deleterious | D | 0.528611746 | None | None | N |
V/H | 0.9937 | likely_pathogenic | 0.9939 | pathogenic | -2.632 | Highly Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
V/I | 0.0785 | likely_benign | 0.079 | benign | -0.599 | Destabilizing | 0.008 | N | 0.197 | neutral | None | None | None | None | N |
V/K | 0.99 | likely_pathogenic | 0.9901 | pathogenic | -1.821 | Destabilizing | 0.978 | D | 0.862 | deleterious | None | None | None | None | N |
V/L | 0.4519 | ambiguous | 0.4469 | ambiguous | -0.599 | Destabilizing | 0.125 | N | 0.382 | neutral | N | 0.514955707 | None | None | N |
V/M | 0.4437 | ambiguous | 0.4339 | ambiguous | -1.194 | Destabilizing | 0.942 | D | 0.681 | prob.neutral | N | 0.491389278 | None | None | N |
V/N | 0.9785 | likely_pathogenic | 0.979 | pathogenic | -2.399 | Highly Destabilizing | 0.993 | D | 0.866 | deleterious | None | None | None | None | N |
V/P | 0.994 | likely_pathogenic | 0.9938 | pathogenic | -1.129 | Destabilizing | 0.993 | D | 0.834 | deleterious | None | None | None | None | N |
V/Q | 0.9802 | likely_pathogenic | 0.9812 | pathogenic | -2.137 | Highly Destabilizing | 0.993 | D | 0.842 | deleterious | None | None | None | None | N |
V/R | 0.9794 | likely_pathogenic | 0.98 | pathogenic | -1.823 | Destabilizing | 0.993 | D | 0.868 | deleterious | None | None | None | None | N |
V/S | 0.893 | likely_pathogenic | 0.888 | pathogenic | -3.017 | Highly Destabilizing | 0.978 | D | 0.839 | deleterious | None | None | None | None | N |
V/T | 0.815 | likely_pathogenic | 0.8091 | pathogenic | -2.577 | Highly Destabilizing | 0.86 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/W | 0.9952 | likely_pathogenic | 0.9949 | pathogenic | -1.813 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
V/Y | 0.9676 | likely_pathogenic | 0.967 | pathogenic | -1.493 | Destabilizing | 0.978 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.