Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22178 | 66757;66758;66759 | chr2:178581736;178581735;178581734 | chr2:179446463;179446462;179446461 |
N2AB | 20537 | 61834;61835;61836 | chr2:178581736;178581735;178581734 | chr2:179446463;179446462;179446461 |
N2A | 19610 | 59053;59054;59055 | chr2:178581736;178581735;178581734 | chr2:179446463;179446462;179446461 |
N2B | 13113 | 39562;39563;39564 | chr2:178581736;178581735;178581734 | chr2:179446463;179446462;179446461 |
Novex-1 | 13238 | 39937;39938;39939 | chr2:178581736;178581735;178581734 | chr2:179446463;179446462;179446461 |
Novex-2 | 13305 | 40138;40139;40140 | chr2:178581736;178581735;178581734 | chr2:179446463;179446462;179446461 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 0.801 | N | 0.482 | 0.194 | 0.230578612272 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
G/S | None | None | 0.022 | N | 0.153 | 0.136 | 0.141422826196 | gnomAD-4.0.0 | 1.60301E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87606E-06 | 0 | 0 |
G/V | None | None | 0.801 | N | 0.557 | 0.226 | 0.430239905395 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1745 | likely_benign | 0.1623 | benign | -0.488 | Destabilizing | 0.454 | N | 0.391 | neutral | N | 0.381817864 | None | None | I |
G/C | 0.2631 | likely_benign | 0.2628 | benign | -0.616 | Destabilizing | 0.997 | D | 0.612 | neutral | N | 0.44238632 | None | None | I |
G/D | 0.6533 | likely_pathogenic | 0.6716 | pathogenic | -1.577 | Destabilizing | 0.801 | D | 0.482 | neutral | N | 0.404211934 | None | None | I |
G/E | 0.5374 | ambiguous | 0.5674 | pathogenic | -1.49 | Destabilizing | 0.842 | D | 0.535 | neutral | None | None | None | None | I |
G/F | 0.8206 | likely_pathogenic | 0.8106 | pathogenic | -0.646 | Destabilizing | 0.991 | D | 0.639 | neutral | None | None | None | None | I |
G/H | 0.7076 | likely_pathogenic | 0.7203 | pathogenic | -1.647 | Destabilizing | 0.998 | D | 0.581 | neutral | None | None | None | None | I |
G/I | 0.4164 | ambiguous | 0.4217 | ambiguous | 0.338 | Stabilizing | 0.949 | D | 0.609 | neutral | None | None | None | None | I |
G/K | 0.8035 | likely_pathogenic | 0.8311 | pathogenic | -1.134 | Destabilizing | 0.842 | D | 0.533 | neutral | None | None | None | None | I |
G/L | 0.5538 | ambiguous | 0.5585 | ambiguous | 0.338 | Stabilizing | 0.842 | D | 0.54 | neutral | None | None | None | None | I |
G/M | 0.5173 | ambiguous | 0.5153 | ambiguous | 0.25 | Stabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | I |
G/N | 0.3977 | ambiguous | 0.3988 | ambiguous | -1.072 | Destabilizing | 0.842 | D | 0.467 | neutral | None | None | None | None | I |
G/P | 0.9706 | likely_pathogenic | 0.9694 | pathogenic | 0.108 | Stabilizing | 0.974 | D | 0.579 | neutral | None | None | None | None | I |
G/Q | 0.5515 | ambiguous | 0.573 | pathogenic | -1.018 | Destabilizing | 0.974 | D | 0.596 | neutral | None | None | None | None | I |
G/R | 0.7149 | likely_pathogenic | 0.7422 | pathogenic | -1.134 | Destabilizing | 0.934 | D | 0.577 | neutral | N | 0.41800795 | None | None | I |
G/S | 0.1078 | likely_benign | 0.102 | benign | -1.335 | Destabilizing | 0.022 | N | 0.153 | neutral | N | 0.335042637 | None | None | I |
G/T | 0.1569 | likely_benign | 0.149 | benign | -1.144 | Destabilizing | 0.029 | N | 0.299 | neutral | None | None | None | None | I |
G/V | 0.3001 | likely_benign | 0.2919 | benign | 0.108 | Stabilizing | 0.801 | D | 0.557 | neutral | N | 0.419778819 | None | None | I |
G/W | 0.7306 | likely_pathogenic | 0.7519 | pathogenic | -1.387 | Destabilizing | 0.998 | D | 0.618 | neutral | None | None | None | None | I |
G/Y | 0.7205 | likely_pathogenic | 0.7209 | pathogenic | -0.762 | Destabilizing | 0.991 | D | 0.632 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.