Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22179 | 66760;66761;66762 | chr2:178581733;178581732;178581731 | chr2:179446460;179446459;179446458 |
N2AB | 20538 | 61837;61838;61839 | chr2:178581733;178581732;178581731 | chr2:179446460;179446459;179446458 |
N2A | 19611 | 59056;59057;59058 | chr2:178581733;178581732;178581731 | chr2:179446460;179446459;179446458 |
N2B | 13114 | 39565;39566;39567 | chr2:178581733;178581732;178581731 | chr2:179446460;179446459;179446458 |
Novex-1 | 13239 | 39940;39941;39942 | chr2:178581733;178581732;178581731 | chr2:179446460;179446459;179446458 |
Novex-2 | 13306 | 40141;40142;40143 | chr2:178581733;178581732;178581731 | chr2:179446460;179446459;179446458 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs747865430 | 0.127 | 0.999 | N | 0.637 | 0.368 | 0.306695030598 | gnomAD-2.1.1 | 8.33E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.24E-06 | 1.71292E-04 |
K/E | rs747865430 | 0.127 | 0.999 | N | 0.637 | 0.368 | 0.306695030598 | gnomAD-4.0.0 | 3.20492E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87543E-06 | 0 | 3.04229E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6766 | likely_pathogenic | 0.7152 | pathogenic | -0.306 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
K/C | 0.8736 | likely_pathogenic | 0.8814 | pathogenic | -0.629 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
K/D | 0.9143 | likely_pathogenic | 0.9343 | pathogenic | -0.269 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
K/E | 0.5662 | likely_pathogenic | 0.6266 | pathogenic | -0.196 | Destabilizing | 0.999 | D | 0.637 | neutral | N | 0.500317116 | None | None | I |
K/F | 0.9236 | likely_pathogenic | 0.9293 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
K/G | 0.8586 | likely_pathogenic | 0.8901 | pathogenic | -0.548 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
K/H | 0.5776 | likely_pathogenic | 0.5991 | pathogenic | -0.632 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
K/I | 0.6335 | likely_pathogenic | 0.6649 | pathogenic | 0.279 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
K/L | 0.6093 | likely_pathogenic | 0.6353 | pathogenic | 0.279 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
K/M | 0.5075 | ambiguous | 0.5366 | ambiguous | -0.212 | Destabilizing | 1.0 | D | 0.746 | deleterious | N | 0.474446658 | None | None | I |
K/N | 0.8195 | likely_pathogenic | 0.8482 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.479611218 | None | None | I |
K/P | 0.5788 | likely_pathogenic | 0.6193 | pathogenic | 0.11 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
K/Q | 0.3006 | likely_benign | 0.3179 | benign | -0.308 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.505128289 | None | None | I |
K/R | 0.1098 | likely_benign | 0.1101 | benign | -0.192 | Destabilizing | 0.999 | D | 0.62 | neutral | N | 0.460702722 | None | None | I |
K/S | 0.7992 | likely_pathogenic | 0.831 | pathogenic | -0.736 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | I |
K/T | 0.5387 | ambiguous | 0.5866 | pathogenic | -0.488 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.520943104 | None | None | I |
K/V | 0.6001 | likely_pathogenic | 0.6277 | pathogenic | 0.11 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
K/W | 0.9379 | likely_pathogenic | 0.9461 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
K/Y | 0.8667 | likely_pathogenic | 0.8787 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.