Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2218 | 6877;6878;6879 | chr2:178775059;178775058;178775057 | chr2:179639786;179639785;179639784 |
N2AB | 2218 | 6877;6878;6879 | chr2:178775059;178775058;178775057 | chr2:179639786;179639785;179639784 |
N2A | 2218 | 6877;6878;6879 | chr2:178775059;178775058;178775057 | chr2:179639786;179639785;179639784 |
N2B | 2172 | 6739;6740;6741 | chr2:178775059;178775058;178775057 | chr2:179639786;179639785;179639784 |
Novex-1 | 2172 | 6739;6740;6741 | chr2:178775059;178775058;178775057 | chr2:179639786;179639785;179639784 |
Novex-2 | 2172 | 6739;6740;6741 | chr2:178775059;178775058;178775057 | chr2:179639786;179639785;179639784 |
Novex-3 | 2218 | 6877;6878;6879 | chr2:178775059;178775058;178775057 | chr2:179639786;179639785;179639784 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.892 | N | 0.377 | 0.255 | 0.134241683229 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1457 | likely_benign | 0.1464 | benign | 0.076 | Stabilizing | 0.805 | D | 0.356 | neutral | N | 0.341996669 | None | None | N |
D/C | 0.5257 | ambiguous | 0.5342 | ambiguous | -0.213 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | N |
D/E | 0.1203 | likely_benign | 0.1186 | benign | -0.42 | Destabilizing | 0.025 | N | 0.254 | neutral | N | 0.351326325 | None | None | N |
D/F | 0.3983 | ambiguous | 0.4083 | ambiguous | -0.069 | Destabilizing | 0.999 | D | 0.476 | neutral | None | None | None | None | N |
D/G | 0.1245 | likely_benign | 0.1254 | benign | -0.004 | Destabilizing | 0.892 | D | 0.377 | neutral | N | 0.331192701 | None | None | N |
D/H | 0.2032 | likely_benign | 0.2025 | benign | 0.599 | Stabilizing | 0.995 | D | 0.378 | neutral | N | 0.373923822 | None | None | N |
D/I | 0.2227 | likely_benign | 0.2301 | benign | 0.217 | Stabilizing | 0.987 | D | 0.5 | neutral | None | None | None | None | N |
D/K | 0.2104 | likely_benign | 0.2097 | benign | 0.386 | Stabilizing | 0.073 | N | 0.317 | neutral | None | None | None | None | N |
D/L | 0.2442 | likely_benign | 0.2421 | benign | 0.217 | Stabilizing | 0.975 | D | 0.504 | neutral | None | None | None | None | N |
D/M | 0.415 | ambiguous | 0.4199 | ambiguous | -0.025 | Destabilizing | 0.999 | D | 0.507 | neutral | None | None | None | None | N |
D/N | 0.0709 | likely_benign | 0.0705 | benign | 0.179 | Stabilizing | 0.967 | D | 0.379 | neutral | N | 0.352401363 | None | None | N |
D/P | 0.3998 | ambiguous | 0.3977 | ambiguous | 0.187 | Stabilizing | 0.987 | D | 0.38 | neutral | None | None | None | None | N |
D/Q | 0.2206 | likely_benign | 0.2185 | benign | 0.165 | Stabilizing | 0.95 | D | 0.414 | neutral | None | None | None | None | N |
D/R | 0.2537 | likely_benign | 0.2535 | benign | 0.597 | Stabilizing | 0.95 | D | 0.399 | neutral | None | None | None | None | N |
D/S | 0.0935 | likely_benign | 0.0924 | benign | 0.089 | Stabilizing | 0.916 | D | 0.365 | neutral | None | None | None | None | N |
D/T | 0.1794 | likely_benign | 0.1811 | benign | 0.161 | Stabilizing | 0.975 | D | 0.37 | neutral | None | None | None | None | N |
D/V | 0.1602 | likely_benign | 0.1622 | benign | 0.187 | Stabilizing | 0.967 | D | 0.504 | neutral | N | 0.374201043 | None | None | N |
D/W | 0.745 | likely_pathogenic | 0.7542 | pathogenic | -0.063 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
D/Y | 0.1776 | likely_benign | 0.1818 | benign | 0.145 | Stabilizing | 0.999 | D | 0.479 | neutral | N | 0.440533599 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.