Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22187 | 66784;66785;66786 | chr2:178581709;178581708;178581707 | chr2:179446436;179446435;179446434 |
N2AB | 20546 | 61861;61862;61863 | chr2:178581709;178581708;178581707 | chr2:179446436;179446435;179446434 |
N2A | 19619 | 59080;59081;59082 | chr2:178581709;178581708;178581707 | chr2:179446436;179446435;179446434 |
N2B | 13122 | 39589;39590;39591 | chr2:178581709;178581708;178581707 | chr2:179446436;179446435;179446434 |
Novex-1 | 13247 | 39964;39965;39966 | chr2:178581709;178581708;178581707 | chr2:179446436;179446435;179446434 |
Novex-2 | 13314 | 40165;40166;40167 | chr2:178581709;178581708;178581707 | chr2:179446436;179446435;179446434 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.989 | N | 0.575 | 0.37 | 0.458464862945 | gnomAD-4.0.0 | 6.85345E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00336E-07 | 0 | 0 |
P/S | rs1160117316 | None | 0.961 | N | 0.478 | 0.36 | 0.357724736475 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs1160117316 | None | 0.961 | N | 0.478 | 0.36 | 0.357724736475 | gnomAD-4.0.0 | 6.57644E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47085E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1125 | likely_benign | 0.1127 | benign | -0.667 | Destabilizing | 0.961 | D | 0.449 | neutral | N | 0.509016743 | None | None | I |
P/C | 0.67 | likely_pathogenic | 0.7023 | pathogenic | -0.625 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
P/D | 0.3766 | ambiguous | 0.3746 | ambiguous | -0.305 | Destabilizing | 0.092 | N | 0.179 | neutral | None | None | None | None | I |
P/E | 0.2343 | likely_benign | 0.2418 | benign | -0.412 | Destabilizing | 0.155 | N | 0.159 | neutral | None | None | None | None | I |
P/F | 0.7833 | likely_pathogenic | 0.7937 | pathogenic | -0.814 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | I |
P/G | 0.4403 | ambiguous | 0.465 | ambiguous | -0.827 | Destabilizing | 0.985 | D | 0.519 | neutral | None | None | None | None | I |
P/H | 0.3063 | likely_benign | 0.3257 | benign | -0.368 | Destabilizing | 1.0 | D | 0.584 | neutral | N | 0.497314307 | None | None | I |
P/I | 0.533 | ambiguous | 0.5505 | ambiguous | -0.389 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
P/K | 0.3502 | ambiguous | 0.3804 | ambiguous | -0.504 | Destabilizing | 0.97 | D | 0.467 | neutral | None | None | None | None | I |
P/L | 0.2454 | likely_benign | 0.2571 | benign | -0.389 | Destabilizing | 0.994 | D | 0.523 | neutral | N | 0.503999805 | None | None | I |
P/M | 0.4744 | ambiguous | 0.4879 | ambiguous | -0.325 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | I |
P/N | 0.3578 | ambiguous | 0.3517 | ambiguous | -0.213 | Destabilizing | 0.991 | D | 0.505 | neutral | None | None | None | None | I |
P/Q | 0.188 | likely_benign | 0.2019 | benign | -0.47 | Destabilizing | 0.991 | D | 0.468 | neutral | None | None | None | None | I |
P/R | 0.2803 | likely_benign | 0.3152 | benign | 0.039 | Stabilizing | 0.989 | D | 0.575 | neutral | N | 0.481678814 | None | None | I |
P/S | 0.1692 | likely_benign | 0.1724 | benign | -0.628 | Destabilizing | 0.961 | D | 0.478 | neutral | N | 0.484690554 | None | None | I |
P/T | 0.167 | likely_benign | 0.1722 | benign | -0.63 | Destabilizing | 0.98 | D | 0.507 | neutral | N | 0.484121123 | None | None | I |
P/V | 0.3322 | likely_benign | 0.3564 | ambiguous | -0.445 | Destabilizing | 0.996 | D | 0.501 | neutral | None | None | None | None | I |
P/W | 0.8542 | likely_pathogenic | 0.8745 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
P/Y | 0.6855 | likely_pathogenic | 0.705 | pathogenic | -0.587 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.