Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22192 | 66799;66800;66801 | chr2:178581694;178581693;178581692 | chr2:179446421;179446420;179446419 |
N2AB | 20551 | 61876;61877;61878 | chr2:178581694;178581693;178581692 | chr2:179446421;179446420;179446419 |
N2A | 19624 | 59095;59096;59097 | chr2:178581694;178581693;178581692 | chr2:179446421;179446420;179446419 |
N2B | 13127 | 39604;39605;39606 | chr2:178581694;178581693;178581692 | chr2:179446421;179446420;179446419 |
Novex-1 | 13252 | 39979;39980;39981 | chr2:178581694;178581693;178581692 | chr2:179446421;179446420;179446419 |
Novex-2 | 13319 | 40180;40181;40182 | chr2:178581694;178581693;178581692 | chr2:179446421;179446420;179446419 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.988 | N | 0.763 | 0.286 | 0.581410409299 | gnomAD-4.0.0 | 1.59535E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86425E-06 | 0 | 0 |
L/P | None | None | 0.998 | N | 0.816 | 0.572 | 0.838659699283 | gnomAD-4.0.0 | 2.40066E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6053 | likely_pathogenic | 0.6388 | pathogenic | -3.086 | Highly Destabilizing | 0.938 | D | 0.645 | neutral | None | None | None | None | N |
L/C | 0.6837 | likely_pathogenic | 0.7074 | pathogenic | -2.266 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/D | 0.9723 | likely_pathogenic | 0.9763 | pathogenic | -3.632 | Highly Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
L/E | 0.8287 | likely_pathogenic | 0.8492 | pathogenic | -3.362 | Highly Destabilizing | 0.995 | D | 0.793 | deleterious | None | None | None | None | N |
L/F | 0.3584 | ambiguous | 0.3492 | ambiguous | -1.806 | Destabilizing | 0.988 | D | 0.763 | deleterious | N | 0.485734452 | None | None | N |
L/G | 0.9246 | likely_pathogenic | 0.9396 | pathogenic | -3.643 | Highly Destabilizing | 0.995 | D | 0.763 | deleterious | None | None | None | None | N |
L/H | 0.6134 | likely_pathogenic | 0.6483 | pathogenic | -3.1 | Highly Destabilizing | 0.999 | D | 0.803 | deleterious | N | 0.511592902 | None | None | N |
L/I | 0.1226 | likely_benign | 0.1198 | benign | -1.426 | Destabilizing | 0.825 | D | 0.604 | neutral | N | 0.384282166 | None | None | N |
L/K | 0.7415 | likely_pathogenic | 0.7814 | pathogenic | -2.491 | Highly Destabilizing | 0.995 | D | 0.748 | deleterious | None | None | None | None | N |
L/M | 0.1684 | likely_benign | 0.175 | benign | -1.462 | Destabilizing | 0.995 | D | 0.769 | deleterious | None | None | None | None | N |
L/N | 0.8662 | likely_pathogenic | 0.865 | pathogenic | -2.987 | Highly Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
L/P | 0.9933 | likely_pathogenic | 0.995 | pathogenic | -1.968 | Destabilizing | 0.998 | D | 0.816 | deleterious | N | 0.500602309 | None | None | N |
L/Q | 0.5139 | ambiguous | 0.5641 | pathogenic | -2.765 | Highly Destabilizing | 0.998 | D | 0.792 | deleterious | None | None | None | None | N |
L/R | 0.6303 | likely_pathogenic | 0.6902 | pathogenic | -2.217 | Highly Destabilizing | 0.994 | D | 0.796 | deleterious | N | 0.488694612 | None | None | N |
L/S | 0.773 | likely_pathogenic | 0.8044 | pathogenic | -3.604 | Highly Destabilizing | 0.995 | D | 0.751 | deleterious | None | None | None | None | N |
L/T | 0.537 | ambiguous | 0.5831 | pathogenic | -3.196 | Highly Destabilizing | 0.991 | D | 0.741 | deleterious | None | None | None | None | N |
L/V | 0.1324 | likely_benign | 0.1326 | benign | -1.968 | Destabilizing | 0.067 | N | 0.349 | neutral | N | 0.415719793 | None | None | N |
L/W | 0.6413 | likely_pathogenic | 0.6825 | pathogenic | -2.236 | Highly Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/Y | 0.6781 | likely_pathogenic | 0.6803 | pathogenic | -2.048 | Highly Destabilizing | 0.995 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.