Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22195 | 66808;66809;66810 | chr2:178581685;178581684;178581683 | chr2:179446412;179446411;179446410 |
N2AB | 20554 | 61885;61886;61887 | chr2:178581685;178581684;178581683 | chr2:179446412;179446411;179446410 |
N2A | 19627 | 59104;59105;59106 | chr2:178581685;178581684;178581683 | chr2:179446412;179446411;179446410 |
N2B | 13130 | 39613;39614;39615 | chr2:178581685;178581684;178581683 | chr2:179446412;179446411;179446410 |
Novex-1 | 13255 | 39988;39989;39990 | chr2:178581685;178581684;178581683 | chr2:179446412;179446411;179446410 |
Novex-2 | 13322 | 40189;40190;40191 | chr2:178581685;178581684;178581683 | chr2:179446412;179446411;179446410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.017 | N | 0.313 | 0.045 | 0.443695250439 | gnomAD-4.0.0 | 1.59442E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88494E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1808 | likely_benign | 0.2692 | benign | -1.936 | Destabilizing | 0.001 | N | 0.153 | neutral | N | 0.383898163 | None | None | N |
V/C | 0.465 | ambiguous | 0.5467 | ambiguous | -1.166 | Destabilizing | 0.001 | N | 0.438 | neutral | None | None | None | None | N |
V/D | 0.9082 | likely_pathogenic | 0.9365 | pathogenic | -3.09 | Highly Destabilizing | 0.418 | N | 0.744 | deleterious | None | None | None | None | N |
V/E | 0.7345 | likely_pathogenic | 0.778 | pathogenic | -2.789 | Highly Destabilizing | 0.351 | N | 0.744 | deleterious | N | 0.499954543 | None | None | N |
V/F | 0.1953 | likely_benign | 0.2119 | benign | -1.216 | Destabilizing | 0.002 | N | 0.436 | neutral | None | None | None | None | N |
V/G | 0.3118 | likely_benign | 0.4081 | ambiguous | -2.491 | Highly Destabilizing | 0.101 | N | 0.693 | prob.neutral | N | 0.467631481 | None | None | N |
V/H | 0.7951 | likely_pathogenic | 0.8174 | pathogenic | -2.57 | Highly Destabilizing | 0.836 | D | 0.761 | deleterious | None | None | None | None | N |
V/I | 0.1188 | likely_benign | 0.1161 | benign | -0.323 | Destabilizing | 0.101 | N | 0.431 | neutral | N | 0.403926719 | None | None | N |
V/K | 0.6923 | likely_pathogenic | 0.7007 | pathogenic | -1.558 | Destabilizing | 0.418 | N | 0.743 | deleterious | None | None | None | None | N |
V/L | 0.3272 | likely_benign | 0.3455 | ambiguous | -0.323 | Destabilizing | 0.017 | N | 0.313 | neutral | N | 0.447965498 | None | None | N |
V/M | 0.17 | likely_benign | 0.1703 | benign | -0.465 | Destabilizing | 0.027 | N | 0.319 | neutral | None | None | None | None | N |
V/N | 0.7193 | likely_pathogenic | 0.7952 | pathogenic | -2.239 | Highly Destabilizing | 0.418 | N | 0.763 | deleterious | None | None | None | None | N |
V/P | 0.9915 | likely_pathogenic | 0.9938 | pathogenic | -0.843 | Destabilizing | 0.593 | D | 0.763 | deleterious | None | None | None | None | N |
V/Q | 0.5772 | likely_pathogenic | 0.6105 | pathogenic | -1.902 | Destabilizing | 0.593 | D | 0.777 | deleterious | None | None | None | None | N |
V/R | 0.6113 | likely_pathogenic | 0.6413 | pathogenic | -1.723 | Destabilizing | 0.418 | N | 0.77 | deleterious | None | None | None | None | N |
V/S | 0.3421 | ambiguous | 0.4454 | ambiguous | -2.636 | Highly Destabilizing | 0.004 | N | 0.557 | neutral | None | None | None | None | N |
V/T | 0.3379 | likely_benign | 0.4085 | ambiguous | -2.192 | Highly Destabilizing | 0.129 | N | 0.493 | neutral | None | None | None | None | N |
V/W | 0.8794 | likely_pathogenic | 0.8849 | pathogenic | -1.845 | Destabilizing | 0.94 | D | 0.761 | deleterious | None | None | None | None | N |
V/Y | 0.4804 | ambiguous | 0.5099 | ambiguous | -1.438 | Destabilizing | 0.004 | N | 0.413 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.