Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22207 | 66844;66845;66846 | chr2:178581649;178581648;178581647 | chr2:179446376;179446375;179446374 |
N2AB | 20566 | 61921;61922;61923 | chr2:178581649;178581648;178581647 | chr2:179446376;179446375;179446374 |
N2A | 19639 | 59140;59141;59142 | chr2:178581649;178581648;178581647 | chr2:179446376;179446375;179446374 |
N2B | 13142 | 39649;39650;39651 | chr2:178581649;178581648;178581647 | chr2:179446376;179446375;179446374 |
Novex-1 | 13267 | 40024;40025;40026 | chr2:178581649;178581648;178581647 | chr2:179446376;179446375;179446374 |
Novex-2 | 13334 | 40225;40226;40227 | chr2:178581649;178581648;178581647 | chr2:179446376;179446375;179446374 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs2047770950 | None | 0.41 | N | 0.609 | 0.166 | 0.139678290688 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs2047770950 | None | 0.41 | N | 0.609 | 0.166 | 0.139678290688 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8817 | likely_pathogenic | 0.8764 | pathogenic | -1.046 | Destabilizing | 0.48 | N | 0.561 | neutral | None | None | None | None | N |
N/C | 0.7046 | likely_pathogenic | 0.7031 | pathogenic | -0.148 | Destabilizing | 0.98 | D | 0.769 | deleterious | None | None | None | None | N |
N/D | 0.8174 | likely_pathogenic | 0.8291 | pathogenic | -0.876 | Destabilizing | 0.41 | N | 0.541 | neutral | N | 0.520001741 | None | None | N |
N/E | 0.9761 | likely_pathogenic | 0.9769 | pathogenic | -0.674 | Destabilizing | 0.48 | N | 0.604 | neutral | None | None | None | None | N |
N/F | 0.9732 | likely_pathogenic | 0.971 | pathogenic | -0.585 | Destabilizing | 0.929 | D | 0.789 | deleterious | None | None | None | None | N |
N/G | 0.8324 | likely_pathogenic | 0.8314 | pathogenic | -1.47 | Destabilizing | 0.48 | N | 0.528 | neutral | None | None | None | None | N |
N/H | 0.5776 | likely_pathogenic | 0.5668 | pathogenic | -0.988 | Destabilizing | 0.908 | D | 0.749 | deleterious | N | 0.50740059 | None | None | N |
N/I | 0.8614 | likely_pathogenic | 0.8448 | pathogenic | 0.08 | Stabilizing | 0.83 | D | 0.781 | deleterious | D | 0.52232997 | None | None | N |
N/K | 0.9842 | likely_pathogenic | 0.985 | pathogenic | -0.152 | Destabilizing | 0.41 | N | 0.609 | neutral | N | 0.517942871 | None | None | N |
N/L | 0.862 | likely_pathogenic | 0.8527 | pathogenic | 0.08 | Stabilizing | 0.866 | D | 0.723 | prob.delet. | None | None | None | None | N |
N/M | 0.9218 | likely_pathogenic | 0.9139 | pathogenic | 0.416 | Stabilizing | 0.993 | D | 0.755 | deleterious | None | None | None | None | N |
N/P | 0.9259 | likely_pathogenic | 0.9373 | pathogenic | -0.265 | Destabilizing | 0.866 | D | 0.741 | deleterious | None | None | None | None | N |
N/Q | 0.946 | likely_pathogenic | 0.9453 | pathogenic | -0.744 | Destabilizing | 0.866 | D | 0.752 | deleterious | None | None | None | None | N |
N/R | 0.9681 | likely_pathogenic | 0.9711 | pathogenic | -0.375 | Destabilizing | 0.866 | D | 0.725 | prob.delet. | None | None | None | None | N |
N/S | 0.2429 | likely_benign | 0.2378 | benign | -1.117 | Destabilizing | 0.004 | N | 0.373 | neutral | N | 0.508840598 | None | None | N |
N/T | 0.4653 | ambiguous | 0.4299 | ambiguous | -0.69 | Destabilizing | 0.41 | N | 0.583 | neutral | N | 0.43640171 | None | None | N |
N/V | 0.8258 | likely_pathogenic | 0.8104 | pathogenic | -0.265 | Destabilizing | 0.866 | D | 0.763 | deleterious | None | None | None | None | N |
N/W | 0.9925 | likely_pathogenic | 0.9934 | pathogenic | -0.34 | Destabilizing | 0.993 | D | 0.747 | deleterious | None | None | None | None | N |
N/Y | 0.868 | likely_pathogenic | 0.8701 | pathogenic | -0.079 | Destabilizing | 0.908 | D | 0.76 | deleterious | D | 0.522466043 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.