Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22209 | 66850;66851;66852 | chr2:178581643;178581642;178581641 | chr2:179446370;179446369;179446368 |
N2AB | 20568 | 61927;61928;61929 | chr2:178581643;178581642;178581641 | chr2:179446370;179446369;179446368 |
N2A | 19641 | 59146;59147;59148 | chr2:178581643;178581642;178581641 | chr2:179446370;179446369;179446368 |
N2B | 13144 | 39655;39656;39657 | chr2:178581643;178581642;178581641 | chr2:179446370;179446369;179446368 |
Novex-1 | 13269 | 40030;40031;40032 | chr2:178581643;178581642;178581641 | chr2:179446370;179446369;179446368 |
Novex-2 | 13336 | 40231;40232;40233 | chr2:178581643;178581642;178581641 | chr2:179446370;179446369;179446368 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs779009635 | -0.138 | 0.976 | N | 0.645 | 0.436 | 0.711619551443 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
P/L | rs779009635 | -0.138 | 0.976 | N | 0.645 | 0.436 | 0.711619551443 | gnomAD-4.0.0 | 2.05388E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69949E-06 | 0 | 0 |
P/T | None | None | 0.988 | N | 0.565 | 0.354 | 0.500868654924 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2848 | likely_benign | 0.2794 | benign | -0.345 | Destabilizing | 0.067 | N | 0.282 | neutral | N | 0.515289355 | None | None | I |
P/C | 0.9161 | likely_pathogenic | 0.9219 | pathogenic | -0.786 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/D | 0.9338 | likely_pathogenic | 0.9336 | pathogenic | -0.402 | Destabilizing | 0.995 | D | 0.607 | neutral | None | None | None | None | I |
P/E | 0.8293 | likely_pathogenic | 0.8244 | pathogenic | -0.516 | Destabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | I |
P/F | 0.9421 | likely_pathogenic | 0.9472 | pathogenic | -0.733 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/G | 0.736 | likely_pathogenic | 0.7327 | pathogenic | -0.402 | Destabilizing | 0.938 | D | 0.523 | neutral | None | None | None | None | I |
P/H | 0.7486 | likely_pathogenic | 0.763 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
P/I | 0.808 | likely_pathogenic | 0.8118 | pathogenic | -0.334 | Destabilizing | 0.991 | D | 0.695 | prob.neutral | None | None | None | None | I |
P/K | 0.8496 | likely_pathogenic | 0.8568 | pathogenic | -0.409 | Destabilizing | 0.991 | D | 0.568 | neutral | None | None | None | None | I |
P/L | 0.5318 | ambiguous | 0.5387 | ambiguous | -0.334 | Destabilizing | 0.976 | D | 0.645 | neutral | N | 0.499631712 | None | None | I |
P/M | 0.8523 | likely_pathogenic | 0.8537 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
P/N | 0.8953 | likely_pathogenic | 0.8921 | pathogenic | -0.199 | Destabilizing | 0.995 | D | 0.659 | neutral | None | None | None | None | I |
P/Q | 0.6784 | likely_pathogenic | 0.675 | pathogenic | -0.409 | Destabilizing | 0.994 | D | 0.613 | neutral | N | 0.472310745 | None | None | I |
P/R | 0.741 | likely_pathogenic | 0.7537 | pathogenic | 0.035 | Stabilizing | 0.994 | D | 0.643 | neutral | N | 0.481273967 | None | None | I |
P/S | 0.5509 | ambiguous | 0.5441 | ambiguous | -0.495 | Destabilizing | 0.919 | D | 0.511 | neutral | N | 0.513921131 | None | None | I |
P/T | 0.5011 | ambiguous | 0.4935 | ambiguous | -0.52 | Destabilizing | 0.988 | D | 0.565 | neutral | N | 0.517001509 | None | None | I |
P/V | 0.642 | likely_pathogenic | 0.6512 | pathogenic | -0.311 | Destabilizing | 0.982 | D | 0.583 | neutral | None | None | None | None | I |
P/W | 0.9682 | likely_pathogenic | 0.9733 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
P/Y | 0.9129 | likely_pathogenic | 0.9199 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.