Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22215 | 66868;66869;66870 | chr2:178581625;178581624;178581623 | chr2:179446352;179446351;179446350 |
N2AB | 20574 | 61945;61946;61947 | chr2:178581625;178581624;178581623 | chr2:179446352;179446351;179446350 |
N2A | 19647 | 59164;59165;59166 | chr2:178581625;178581624;178581623 | chr2:179446352;179446351;179446350 |
N2B | 13150 | 39673;39674;39675 | chr2:178581625;178581624;178581623 | chr2:179446352;179446351;179446350 |
Novex-1 | 13275 | 40048;40049;40050 | chr2:178581625;178581624;178581623 | chr2:179446352;179446351;179446350 |
Novex-2 | 13342 | 40249;40250;40251 | chr2:178581625;178581624;178581623 | chr2:179446352;179446351;179446350 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.998 | N | 0.623 | 0.377 | 0.354610295913 | gnomAD-4.0.0 | 1.59361E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.222 | likely_benign | 0.1943 | benign | -0.764 | Destabilizing | 0.919 | D | 0.483 | neutral | N | 0.488311405 | None | None | N |
T/C | 0.4627 | ambiguous | 0.4165 | ambiguous | -0.411 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/D | 0.6813 | likely_pathogenic | 0.6564 | pathogenic | -0.381 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
T/E | 0.5506 | ambiguous | 0.5514 | ambiguous | -0.217 | Destabilizing | 0.995 | D | 0.654 | neutral | None | None | None | None | N |
T/F | 0.7083 | likely_pathogenic | 0.6652 | pathogenic | -0.741 | Destabilizing | 0.991 | D | 0.757 | deleterious | None | None | None | None | N |
T/G | 0.4105 | ambiguous | 0.3892 | ambiguous | -1.121 | Destabilizing | 0.995 | D | 0.665 | neutral | None | None | None | None | N |
T/H | 0.5738 | likely_pathogenic | 0.5405 | ambiguous | -1.046 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
T/I | 0.5766 | likely_pathogenic | 0.5339 | ambiguous | 0.151 | Stabilizing | 0.919 | D | 0.553 | neutral | N | 0.507999049 | None | None | N |
T/K | 0.4023 | ambiguous | 0.3989 | ambiguous | 0.006 | Stabilizing | 0.995 | D | 0.674 | neutral | None | None | None | None | N |
T/L | 0.1611 | likely_benign | 0.1479 | benign | 0.151 | Stabilizing | 0.938 | D | 0.488 | neutral | None | None | None | None | N |
T/M | 0.1382 | likely_benign | 0.125 | benign | -0.024 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
T/N | 0.1639 | likely_benign | 0.1387 | benign | -0.594 | Destabilizing | 0.998 | D | 0.623 | neutral | N | 0.472636232 | None | None | N |
T/P | 0.1973 | likely_benign | 0.1613 | benign | -0.123 | Destabilizing | 0.998 | D | 0.704 | prob.neutral | N | 0.477195363 | None | None | N |
T/Q | 0.3567 | ambiguous | 0.3453 | ambiguous | -0.409 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/R | 0.3756 | ambiguous | 0.3761 | ambiguous | -0.097 | Destabilizing | 0.995 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/S | 0.2719 | likely_benign | 0.2267 | benign | -0.937 | Destabilizing | 0.979 | D | 0.437 | neutral | N | 0.48078976 | None | None | N |
T/V | 0.3799 | ambiguous | 0.3517 | ambiguous | -0.123 | Destabilizing | 0.086 | N | 0.425 | neutral | None | None | None | None | N |
T/W | 0.8979 | likely_pathogenic | 0.8849 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
T/Y | 0.608 | likely_pathogenic | 0.5844 | pathogenic | -0.431 | Destabilizing | 0.995 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.