Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22224 | 66895;66896;66897 | chr2:178581598;178581597;178581596 | chr2:179446325;179446324;179446323 |
N2AB | 20583 | 61972;61973;61974 | chr2:178581598;178581597;178581596 | chr2:179446325;179446324;179446323 |
N2A | 19656 | 59191;59192;59193 | chr2:178581598;178581597;178581596 | chr2:179446325;179446324;179446323 |
N2B | 13159 | 39700;39701;39702 | chr2:178581598;178581597;178581596 | chr2:179446325;179446324;179446323 |
Novex-1 | 13284 | 40075;40076;40077 | chr2:178581598;178581597;178581596 | chr2:179446325;179446324;179446323 |
Novex-2 | 13351 | 40276;40277;40278 | chr2:178581598;178581597;178581596 | chr2:179446325;179446324;179446323 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.978 | N | 0.535 | 0.321 | 0.467669411796 | gnomAD-4.0.0 | 1.59364E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03049E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1615 | likely_benign | 0.174 | benign | -0.463 | Destabilizing | 0.989 | D | 0.444 | neutral | N | 0.473379793 | None | None | N |
E/C | 0.8884 | likely_pathogenic | 0.9071 | pathogenic | -0.002 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/D | 0.2408 | likely_benign | 0.2686 | benign | -0.517 | Destabilizing | 0.054 | N | 0.143 | neutral | D | 0.525831636 | None | None | N |
E/F | 0.8931 | likely_pathogenic | 0.9085 | pathogenic | -0.399 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
E/G | 0.2479 | likely_benign | 0.2615 | benign | -0.693 | Destabilizing | 0.978 | D | 0.471 | neutral | N | 0.503680182 | None | None | N |
E/H | 0.6792 | likely_pathogenic | 0.7225 | pathogenic | -0.423 | Destabilizing | 0.999 | D | 0.467 | neutral | None | None | None | None | N |
E/I | 0.5472 | ambiguous | 0.5718 | pathogenic | 0.117 | Stabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
E/K | 0.2588 | likely_benign | 0.2745 | benign | 0.106 | Stabilizing | 0.978 | D | 0.535 | neutral | N | 0.48233347 | None | None | N |
E/L | 0.5782 | likely_pathogenic | 0.5982 | pathogenic | 0.117 | Stabilizing | 0.998 | D | 0.583 | neutral | None | None | None | None | N |
E/M | 0.5907 | likely_pathogenic | 0.6008 | pathogenic | 0.359 | Stabilizing | 1.0 | D | 0.541 | neutral | None | None | None | None | N |
E/N | 0.4238 | ambiguous | 0.4633 | ambiguous | -0.124 | Destabilizing | 0.983 | D | 0.501 | neutral | None | None | None | None | N |
E/P | 0.3229 | likely_benign | 0.343 | ambiguous | -0.056 | Destabilizing | 0.999 | D | 0.458 | neutral | None | None | None | None | N |
E/Q | 0.1966 | likely_benign | 0.2129 | benign | -0.094 | Destabilizing | 0.989 | D | 0.547 | neutral | N | 0.475509841 | None | None | N |
E/R | 0.4143 | ambiguous | 0.4396 | ambiguous | 0.254 | Stabilizing | 0.998 | D | 0.494 | neutral | None | None | None | None | N |
E/S | 0.2897 | likely_benign | 0.3186 | benign | -0.321 | Destabilizing | 0.983 | D | 0.486 | neutral | None | None | None | None | N |
E/T | 0.32 | likely_benign | 0.3287 | benign | -0.143 | Destabilizing | 0.992 | D | 0.413 | neutral | None | None | None | None | N |
E/V | 0.3299 | likely_benign | 0.3474 | ambiguous | -0.056 | Destabilizing | 0.999 | D | 0.495 | neutral | N | 0.495691238 | None | None | N |
E/W | 0.9633 | likely_pathogenic | 0.9701 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
E/Y | 0.8327 | likely_pathogenic | 0.8561 | pathogenic | -0.166 | Destabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.