Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22240 | 66943;66944;66945 | chr2:178581550;178581549;178581548 | chr2:179446277;179446276;179446275 |
N2AB | 20599 | 62020;62021;62022 | chr2:178581550;178581549;178581548 | chr2:179446277;179446276;179446275 |
N2A | 19672 | 59239;59240;59241 | chr2:178581550;178581549;178581548 | chr2:179446277;179446276;179446275 |
N2B | 13175 | 39748;39749;39750 | chr2:178581550;178581549;178581548 | chr2:179446277;179446276;179446275 |
Novex-1 | 13300 | 40123;40124;40125 | chr2:178581550;178581549;178581548 | chr2:179446277;179446276;179446275 |
Novex-2 | 13367 | 40324;40325;40326 | chr2:178581550;178581549;178581548 | chr2:179446277;179446276;179446275 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs745376985 | -0.537 | 0.994 | N | 0.621 | 0.341 | 0.381916209588 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
Y/C | rs745376985 | -0.537 | 0.994 | N | 0.621 | 0.341 | 0.381916209588 | gnomAD-4.0.0 | 1.37016E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16066E-05 | 1.65959E-05 |
Y/N | None | None | 0.884 | N | 0.627 | 0.334 | 0.500678981321 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6486 | likely_pathogenic | 0.617 | pathogenic | -1.444 | Destabilizing | 0.543 | D | 0.565 | neutral | None | None | None | None | I |
Y/C | 0.2007 | likely_benign | 0.1911 | benign | -0.802 | Destabilizing | 0.994 | D | 0.621 | neutral | N | 0.439092511 | None | None | I |
Y/D | 0.592 | likely_pathogenic | 0.5648 | pathogenic | 0.689 | Stabilizing | 0.884 | D | 0.624 | neutral | N | 0.398862042 | None | None | I |
Y/E | 0.7857 | likely_pathogenic | 0.7506 | pathogenic | 0.77 | Stabilizing | 0.742 | D | 0.629 | neutral | None | None | None | None | I |
Y/F | 0.1036 | likely_benign | 0.1006 | benign | -0.394 | Destabilizing | 0.003 | N | 0.261 | neutral | N | 0.385124741 | None | None | I |
Y/G | 0.7134 | likely_pathogenic | 0.6852 | pathogenic | -1.716 | Destabilizing | 0.742 | D | 0.615 | neutral | None | None | None | None | I |
Y/H | 0.3441 | ambiguous | 0.3142 | benign | -0.148 | Destabilizing | 0.015 | N | 0.289 | neutral | N | 0.429184949 | None | None | I |
Y/I | 0.4746 | ambiguous | 0.4476 | ambiguous | -0.66 | Destabilizing | 0.59 | D | 0.549 | neutral | None | None | None | None | I |
Y/K | 0.7066 | likely_pathogenic | 0.659 | pathogenic | -0.614 | Destabilizing | 0.91 | D | 0.625 | neutral | None | None | None | None | I |
Y/L | 0.5072 | ambiguous | 0.464 | ambiguous | -0.66 | Destabilizing | 0.373 | N | 0.538 | neutral | None | None | None | None | I |
Y/M | 0.6359 | likely_pathogenic | 0.6018 | pathogenic | -0.687 | Destabilizing | 0.953 | D | 0.618 | neutral | None | None | None | None | I |
Y/N | 0.3709 | ambiguous | 0.3185 | benign | -1.019 | Destabilizing | 0.884 | D | 0.627 | neutral | N | 0.43926587 | None | None | I |
Y/P | 0.7546 | likely_pathogenic | 0.736 | pathogenic | -0.911 | Destabilizing | 0.984 | D | 0.625 | neutral | None | None | None | None | I |
Y/Q | 0.6728 | likely_pathogenic | 0.6137 | pathogenic | -0.808 | Destabilizing | 0.91 | D | 0.623 | neutral | None | None | None | None | I |
Y/R | 0.6141 | likely_pathogenic | 0.5636 | ambiguous | -0.382 | Destabilizing | 0.91 | D | 0.645 | neutral | None | None | None | None | I |
Y/S | 0.4285 | ambiguous | 0.3875 | ambiguous | -1.646 | Destabilizing | 0.684 | D | 0.627 | neutral | N | 0.399150044 | None | None | I |
Y/T | 0.5994 | likely_pathogenic | 0.5634 | ambiguous | -1.467 | Destabilizing | 0.742 | D | 0.627 | neutral | None | None | None | None | I |
Y/V | 0.3918 | ambiguous | 0.374 | ambiguous | -0.911 | Destabilizing | 0.037 | N | 0.374 | neutral | None | None | None | None | I |
Y/W | 0.5088 | ambiguous | 0.5021 | ambiguous | -0.125 | Destabilizing | 0.984 | D | 0.623 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.