Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22243 | 66952;66953;66954 | chr2:178581541;178581540;178581539 | chr2:179446268;179446267;179446266 |
N2AB | 20602 | 62029;62030;62031 | chr2:178581541;178581540;178581539 | chr2:179446268;179446267;179446266 |
N2A | 19675 | 59248;59249;59250 | chr2:178581541;178581540;178581539 | chr2:179446268;179446267;179446266 |
N2B | 13178 | 39757;39758;39759 | chr2:178581541;178581540;178581539 | chr2:179446268;179446267;179446266 |
Novex-1 | 13303 | 40132;40133;40134 | chr2:178581541;178581540;178581539 | chr2:179446268;179446267;179446266 |
Novex-2 | 13370 | 40333;40334;40335 | chr2:178581541;178581540;178581539 | chr2:179446268;179446267;179446266 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 1.0 | N | 0.751 | 0.466 | 0.561180645722 | gnomAD-4.0.0 | 4.79862E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 5.66316E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1573 | likely_benign | 0.1541 | benign | -1.577 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.463567197 | None | None | I |
P/C | 0.8058 | likely_pathogenic | 0.8121 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
P/D | 0.9522 | likely_pathogenic | 0.9619 | pathogenic | -1.268 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
P/E | 0.8525 | likely_pathogenic | 0.8784 | pathogenic | -1.282 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
P/F | 0.8993 | likely_pathogenic | 0.9036 | pathogenic | -1.278 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
P/G | 0.7615 | likely_pathogenic | 0.7752 | pathogenic | -1.883 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
P/H | 0.6743 | likely_pathogenic | 0.6998 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.48139519 | None | None | I |
P/I | 0.8034 | likely_pathogenic | 0.8274 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
P/K | 0.8066 | likely_pathogenic | 0.845 | pathogenic | -1.164 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/L | 0.649 | likely_pathogenic | 0.7029 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.827 | deleterious | N | 0.507333351 | None | None | I |
P/M | 0.8301 | likely_pathogenic | 0.852 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
P/N | 0.9166 | likely_pathogenic | 0.9265 | pathogenic | -0.876 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
P/Q | 0.6708 | likely_pathogenic | 0.7209 | pathogenic | -1.085 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
P/R | 0.6592 | likely_pathogenic | 0.7227 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.491902122 | None | None | I |
P/S | 0.4721 | ambiguous | 0.4936 | ambiguous | -1.411 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.491395143 | None | None | I |
P/T | 0.5323 | ambiguous | 0.5749 | pathogenic | -1.321 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.512728628 | None | None | I |
P/V | 0.658 | likely_pathogenic | 0.6912 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/W | 0.9552 | likely_pathogenic | 0.9646 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
P/Y | 0.9003 | likely_pathogenic | 0.9087 | pathogenic | -1.167 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.