Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22252 | 66979;66980;66981 | chr2:178581514;178581513;178581512 | chr2:179446241;179446240;179446239 |
N2AB | 20611 | 62056;62057;62058 | chr2:178581514;178581513;178581512 | chr2:179446241;179446240;179446239 |
N2A | 19684 | 59275;59276;59277 | chr2:178581514;178581513;178581512 | chr2:179446241;179446240;179446239 |
N2B | 13187 | 39784;39785;39786 | chr2:178581514;178581513;178581512 | chr2:179446241;179446240;179446239 |
Novex-1 | 13312 | 40159;40160;40161 | chr2:178581514;178581513;178581512 | chr2:179446241;179446240;179446239 |
Novex-2 | 13379 | 40360;40361;40362 | chr2:178581514;178581513;178581512 | chr2:179446241;179446240;179446239 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.799 | N | 0.755 | 0.329 | 0.574126200305 | gnomAD-4.0.0 | 1.62684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.07844E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1426 | likely_benign | 0.1585 | benign | -2.008 | Highly Destabilizing | 0.002 | N | 0.441 | neutral | N | 0.399411907 | None | None | N |
P/C | 0.6902 | likely_pathogenic | 0.7048 | pathogenic | -2.399 | Highly Destabilizing | 0.993 | D | 0.793 | deleterious | None | None | None | None | N |
P/D | 0.9974 | likely_pathogenic | 0.9973 | pathogenic | -3.038 | Highly Destabilizing | 0.974 | D | 0.685 | prob.delet. | None | None | None | None | N |
P/E | 0.9884 | likely_pathogenic | 0.9884 | pathogenic | -2.909 | Highly Destabilizing | 0.841 | D | 0.688 | prob.delet. | None | None | None | None | N |
P/F | 0.9912 | likely_pathogenic | 0.9889 | pathogenic | -1.383 | Destabilizing | 0.974 | D | 0.777 | deleterious | None | None | None | None | N |
P/G | 0.8515 | likely_pathogenic | 0.867 | pathogenic | -2.407 | Highly Destabilizing | 0.725 | D | 0.663 | prob.neutral | None | None | None | None | N |
P/H | 0.9871 | likely_pathogenic | 0.9857 | pathogenic | -1.869 | Destabilizing | 0.997 | D | 0.758 | deleterious | N | 0.48386545 | None | None | N |
P/I | 0.7831 | likely_pathogenic | 0.7431 | pathogenic | -0.93 | Destabilizing | 0.949 | D | 0.767 | deleterious | None | None | None | None | N |
P/K | 0.9929 | likely_pathogenic | 0.9924 | pathogenic | -1.744 | Destabilizing | 0.841 | D | 0.683 | prob.neutral | None | None | None | None | N |
P/L | 0.6348 | likely_pathogenic | 0.6109 | pathogenic | -0.93 | Destabilizing | 0.799 | D | 0.755 | deleterious | N | 0.516833724 | None | None | N |
P/M | 0.8814 | likely_pathogenic | 0.8642 | pathogenic | -1.33 | Destabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | N |
P/N | 0.9866 | likely_pathogenic | 0.985 | pathogenic | -2.045 | Highly Destabilizing | 0.974 | D | 0.763 | deleterious | None | None | None | None | N |
P/Q | 0.9609 | likely_pathogenic | 0.959 | pathogenic | -2.092 | Highly Destabilizing | 0.974 | D | 0.735 | deleterious | None | None | None | None | N |
P/R | 0.9733 | likely_pathogenic | 0.9733 | pathogenic | -1.38 | Destabilizing | 0.966 | D | 0.759 | deleterious | N | 0.49487936 | None | None | N |
P/S | 0.6916 | likely_pathogenic | 0.6995 | pathogenic | -2.577 | Highly Destabilizing | 0.666 | D | 0.637 | neutral | N | 0.482598002 | None | None | N |
P/T | 0.5361 | ambiguous | 0.5299 | ambiguous | -2.324 | Highly Destabilizing | 0.799 | D | 0.654 | prob.neutral | N | 0.498247963 | None | None | N |
P/V | 0.5149 | ambiguous | 0.4782 | ambiguous | -1.263 | Destabilizing | 0.725 | D | 0.7 | prob.delet. | None | None | None | None | N |
P/W | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -1.69 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
P/Y | 0.9961 | likely_pathogenic | 0.9955 | pathogenic | -1.377 | Destabilizing | 0.991 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.