Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22266 | 67021;67022;67023 | chr2:178580583;178580582;178580581 | chr2:179445310;179445309;179445308 |
N2AB | 20625 | 62098;62099;62100 | chr2:178580583;178580582;178580581 | chr2:179445310;179445309;179445308 |
N2A | 19698 | 59317;59318;59319 | chr2:178580583;178580582;178580581 | chr2:179445310;179445309;179445308 |
N2B | 13201 | 39826;39827;39828 | chr2:178580583;178580582;178580581 | chr2:179445310;179445309;179445308 |
Novex-1 | 13326 | 40201;40202;40203 | chr2:178580583;178580582;178580581 | chr2:179445310;179445309;179445308 |
Novex-2 | 13393 | 40402;40403;40404 | chr2:178580583;178580582;178580581 | chr2:179445310;179445309;179445308 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1380514691 | 0.069 | None | N | 0.255 | 0.048 | 0.0762999501168 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | I | None | 6.51E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/E | rs1380514691 | 0.069 | None | N | 0.255 | 0.048 | 0.0762999501168 | gnomAD-4.0.0 | 6.8535E-07 | None | None | None | None | I | None | 2.99814E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | None | None | 0.22 | D | 0.447 | 0.196 | 0.298745278005 | gnomAD-4.0.0 | 1.59782E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86518E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2682 | likely_benign | 0.3352 | benign | -0.084 | Destabilizing | 0.124 | N | 0.471 | neutral | D | 0.530685669 | None | None | I |
D/C | 0.8259 | likely_pathogenic | 0.8697 | pathogenic | -0.078 | Destabilizing | 0.968 | D | 0.565 | neutral | None | None | None | None | I |
D/E | 0.1114 | likely_benign | 0.148 | benign | -0.184 | Destabilizing | None | N | 0.255 | neutral | N | 0.459265501 | None | None | I |
D/F | 0.81 | likely_pathogenic | 0.8566 | pathogenic | 0.038 | Stabilizing | 0.726 | D | 0.516 | neutral | None | None | None | None | I |
D/G | 0.3449 | ambiguous | 0.4298 | ambiguous | -0.262 | Destabilizing | 0.124 | N | 0.408 | neutral | N | 0.493687592 | None | None | I |
D/H | 0.5498 | ambiguous | 0.6338 | pathogenic | 0.421 | Stabilizing | 0.667 | D | 0.373 | neutral | D | 0.523567695 | None | None | I |
D/I | 0.5571 | ambiguous | 0.6555 | pathogenic | 0.33 | Stabilizing | 0.726 | D | 0.509 | neutral | None | None | None | None | I |
D/K | 0.5776 | likely_pathogenic | 0.7051 | pathogenic | 0.436 | Stabilizing | 0.157 | N | 0.404 | neutral | None | None | None | None | I |
D/L | 0.5515 | ambiguous | 0.6449 | pathogenic | 0.33 | Stabilizing | 0.567 | D | 0.503 | neutral | None | None | None | None | I |
D/M | 0.7431 | likely_pathogenic | 0.8015 | pathogenic | 0.231 | Stabilizing | 0.968 | D | 0.529 | neutral | None | None | None | None | I |
D/N | 0.1842 | likely_benign | 0.2304 | benign | 0.049 | Stabilizing | 0.22 | N | 0.447 | neutral | D | 0.523220979 | None | None | I |
D/P | 0.8707 | likely_pathogenic | 0.886 | pathogenic | 0.214 | Stabilizing | 0.726 | D | 0.359 | neutral | None | None | None | None | I |
D/Q | 0.4787 | ambiguous | 0.5652 | pathogenic | 0.103 | Stabilizing | 0.396 | N | 0.353 | neutral | None | None | None | None | I |
D/R | 0.6864 | likely_pathogenic | 0.7658 | pathogenic | 0.664 | Stabilizing | 0.396 | N | 0.48 | neutral | None | None | None | None | I |
D/S | 0.1876 | likely_benign | 0.2454 | benign | -0.035 | Destabilizing | 0.005 | N | 0.33 | neutral | None | None | None | None | I |
D/T | 0.3479 | ambiguous | 0.4388 | ambiguous | 0.114 | Stabilizing | 0.157 | N | 0.399 | neutral | None | None | None | None | I |
D/V | 0.3527 | ambiguous | 0.4356 | ambiguous | 0.214 | Stabilizing | 0.497 | N | 0.502 | neutral | N | 0.493941081 | None | None | I |
D/W | 0.9531 | likely_pathogenic | 0.9677 | pathogenic | 0.155 | Stabilizing | 0.968 | D | 0.61 | neutral | None | None | None | None | I |
D/Y | 0.4668 | ambiguous | 0.5306 | ambiguous | 0.279 | Stabilizing | 0.859 | D | 0.519 | neutral | N | 0.49444806 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.