Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22270 | 67033;67034;67035 | chr2:178580571;178580570;178580569 | chr2:179445298;179445297;179445296 |
N2AB | 20629 | 62110;62111;62112 | chr2:178580571;178580570;178580569 | chr2:179445298;179445297;179445296 |
N2A | 19702 | 59329;59330;59331 | chr2:178580571;178580570;178580569 | chr2:179445298;179445297;179445296 |
N2B | 13205 | 39838;39839;39840 | chr2:178580571;178580570;178580569 | chr2:179445298;179445297;179445296 |
Novex-1 | 13330 | 40213;40214;40215 | chr2:178580571;178580570;178580569 | chr2:179445298;179445297;179445296 |
Novex-2 | 13397 | 40414;40415;40416 | chr2:178580571;178580570;178580569 | chr2:179445298;179445297;179445296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2047465405 | None | 0.166 | N | 0.323 | 0.107 | 0.233150807113 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs2047465405 | None | 0.166 | N | 0.323 | 0.107 | 0.233150807113 | gnomAD-4.0.0 | 6.57514E-06 | None | None | None | None | I | None | 2.41278E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1495 | likely_benign | 0.1576 | benign | -0.612 | Destabilizing | None | N | 0.115 | neutral | N | 0.480989488 | None | None | I |
T/C | 0.5891 | likely_pathogenic | 0.6181 | pathogenic | -0.431 | Destabilizing | 0.965 | D | 0.369 | neutral | None | None | None | None | I |
T/D | 0.8072 | likely_pathogenic | 0.8242 | pathogenic | 0.636 | Stabilizing | 0.722 | D | 0.457 | neutral | None | None | None | None | I |
T/E | 0.6729 | likely_pathogenic | 0.7018 | pathogenic | 0.618 | Stabilizing | 0.561 | D | 0.393 | neutral | None | None | None | None | I |
T/F | 0.561 | ambiguous | 0.6116 | pathogenic | -0.834 | Destabilizing | 0.561 | D | 0.517 | neutral | None | None | None | None | I |
T/G | 0.4241 | ambiguous | 0.447 | ambiguous | -0.818 | Destabilizing | 0.209 | N | 0.33 | neutral | None | None | None | None | I |
T/H | 0.6032 | likely_pathogenic | 0.621 | pathogenic | -1.057 | Destabilizing | 0.965 | D | 0.396 | neutral | None | None | None | None | I |
T/I | 0.2648 | likely_benign | 0.2959 | benign | -0.171 | Destabilizing | 0.166 | N | 0.323 | neutral | N | 0.464984504 | None | None | I |
T/K | 0.6937 | likely_pathogenic | 0.7041 | pathogenic | -0.324 | Destabilizing | 0.491 | N | 0.385 | neutral | N | 0.493302638 | None | None | I |
T/L | 0.1968 | likely_benign | 0.2197 | benign | -0.171 | Destabilizing | 0.001 | N | 0.147 | neutral | None | None | None | None | I |
T/M | 0.1326 | likely_benign | 0.1491 | benign | -0.1 | Destabilizing | 0.818 | D | 0.39 | neutral | None | None | None | None | I |
T/N | 0.2191 | likely_benign | 0.2315 | benign | -0.233 | Destabilizing | 0.722 | D | 0.349 | neutral | None | None | None | None | I |
T/P | 0.3 | likely_benign | 0.3001 | benign | -0.286 | Destabilizing | 0.662 | D | 0.459 | neutral | N | 0.494764075 | None | None | I |
T/Q | 0.503 | ambiguous | 0.5297 | ambiguous | -0.358 | Destabilizing | 0.901 | D | 0.447 | neutral | None | None | None | None | I |
T/R | 0.6755 | likely_pathogenic | 0.6886 | pathogenic | -0.199 | Destabilizing | 0.662 | D | 0.485 | neutral | N | 0.499844608 | None | None | I |
T/S | 0.2122 | likely_benign | 0.2177 | benign | -0.588 | Destabilizing | 0.166 | N | 0.296 | neutral | N | 0.502439409 | None | None | I |
T/V | 0.1747 | likely_benign | 0.1895 | benign | -0.286 | Destabilizing | 0.001 | N | 0.115 | neutral | None | None | None | None | I |
T/W | 0.8964 | likely_pathogenic | 0.9096 | pathogenic | -0.767 | Destabilizing | 0.991 | D | 0.402 | neutral | None | None | None | None | I |
T/Y | 0.5442 | ambiguous | 0.5835 | pathogenic | -0.504 | Destabilizing | 0.901 | D | 0.489 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.