Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22277 | 67054;67055;67056 | chr2:178580550;178580549;178580548 | chr2:179445277;179445276;179445275 |
N2AB | 20636 | 62131;62132;62133 | chr2:178580550;178580549;178580548 | chr2:179445277;179445276;179445275 |
N2A | 19709 | 59350;59351;59352 | chr2:178580550;178580549;178580548 | chr2:179445277;179445276;179445275 |
N2B | 13212 | 39859;39860;39861 | chr2:178580550;178580549;178580548 | chr2:179445277;179445276;179445275 |
Novex-1 | 13337 | 40234;40235;40236 | chr2:178580550;178580549;178580548 | chr2:179445277;179445276;179445275 |
Novex-2 | 13404 | 40435;40436;40437 | chr2:178580550;178580549;178580548 | chr2:179445277;179445276;179445275 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs768860754 | -1.226 | 0.63 | N | 0.454 | 0.134 | 0.367992661779 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.64E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2606 | likely_benign | 0.2439 | benign | -0.887 | Destabilizing | 0.63 | D | 0.454 | neutral | N | 0.394042507 | None | None | I |
V/C | 0.6985 | likely_pathogenic | 0.6894 | pathogenic | -0.761 | Destabilizing | 0.073 | N | 0.402 | neutral | None | None | None | None | I |
V/D | 0.5376 | ambiguous | 0.5193 | ambiguous | -0.437 | Destabilizing | 0.994 | D | 0.719 | prob.delet. | N | 0.414241634 | None | None | I |
V/E | 0.4623 | ambiguous | 0.4654 | ambiguous | -0.522 | Destabilizing | 0.996 | D | 0.665 | neutral | None | None | None | None | I |
V/F | 0.2855 | likely_benign | 0.2912 | benign | -0.946 | Destabilizing | 0.983 | D | 0.641 | neutral | N | 0.505346428 | None | None | I |
V/G | 0.3029 | likely_benign | 0.2692 | benign | -1.086 | Destabilizing | 0.983 | D | 0.697 | prob.neutral | N | 0.385999027 | None | None | I |
V/H | 0.7547 | likely_pathogenic | 0.7307 | pathogenic | -0.622 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | I |
V/I | 0.1005 | likely_benign | 0.1058 | benign | -0.491 | Destabilizing | 0.773 | D | 0.483 | neutral | N | 0.505519786 | None | None | I |
V/K | 0.5862 | likely_pathogenic | 0.5983 | pathogenic | -0.654 | Destabilizing | 0.987 | D | 0.671 | neutral | None | None | None | None | I |
V/L | 0.3216 | likely_benign | 0.3282 | benign | -0.491 | Destabilizing | 0.63 | D | 0.469 | neutral | N | 0.457131194 | None | None | I |
V/M | 0.1871 | likely_benign | 0.1905 | benign | -0.39 | Destabilizing | 0.996 | D | 0.66 | neutral | None | None | None | None | I |
V/N | 0.3241 | likely_benign | 0.3094 | benign | -0.39 | Destabilizing | 0.996 | D | 0.72 | prob.delet. | None | None | None | None | I |
V/P | 0.9521 | likely_pathogenic | 0.9396 | pathogenic | -0.587 | Destabilizing | 0.996 | D | 0.682 | prob.neutral | None | None | None | None | I |
V/Q | 0.4742 | ambiguous | 0.4783 | ambiguous | -0.636 | Destabilizing | 0.996 | D | 0.683 | prob.neutral | None | None | None | None | I |
V/R | 0.5638 | ambiguous | 0.5783 | pathogenic | -0.125 | Destabilizing | 0.996 | D | 0.725 | prob.delet. | None | None | None | None | I |
V/S | 0.2736 | likely_benign | 0.2574 | benign | -0.856 | Destabilizing | 0.975 | D | 0.615 | neutral | None | None | None | None | I |
V/T | 0.2077 | likely_benign | 0.2025 | benign | -0.834 | Destabilizing | 0.916 | D | 0.518 | neutral | None | None | None | None | I |
V/W | 0.9393 | likely_pathogenic | 0.934 | pathogenic | -1.019 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | I |
V/Y | 0.681 | likely_pathogenic | 0.6732 | pathogenic | -0.721 | Destabilizing | 0.996 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.