Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22278 | 67057;67058;67059 | chr2:178580547;178580546;178580545 | chr2:179445274;179445273;179445272 |
N2AB | 20637 | 62134;62135;62136 | chr2:178580547;178580546;178580545 | chr2:179445274;179445273;179445272 |
N2A | 19710 | 59353;59354;59355 | chr2:178580547;178580546;178580545 | chr2:179445274;179445273;179445272 |
N2B | 13213 | 39862;39863;39864 | chr2:178580547;178580546;178580545 | chr2:179445274;179445273;179445272 |
Novex-1 | 13338 | 40237;40238;40239 | chr2:178580547;178580546;178580545 | chr2:179445274;179445273;179445272 |
Novex-2 | 13405 | 40438;40439;40440 | chr2:178580547;178580546;178580545 | chr2:179445274;179445273;179445272 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1449367862 | -0.084 | 0.994 | N | 0.747 | 0.395 | 0.479286488449 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
T/I | rs1449367862 | -0.084 | 0.994 | N | 0.747 | 0.395 | 0.479286488449 | gnomAD-4.0.0 | 7.96889E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.77017E-05 | 0 | 8.58595E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.181 | likely_benign | 0.1487 | benign | -0.826 | Destabilizing | 0.958 | D | 0.446 | neutral | N | 0.491438555 | None | None | I |
T/C | 0.7185 | likely_pathogenic | 0.631 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
T/D | 0.784 | likely_pathogenic | 0.7057 | pathogenic | -0.599 | Destabilizing | 0.995 | D | 0.656 | neutral | None | None | None | None | I |
T/E | 0.7178 | likely_pathogenic | 0.6317 | pathogenic | -0.579 | Destabilizing | 0.991 | D | 0.659 | neutral | None | None | None | None | I |
T/F | 0.7253 | likely_pathogenic | 0.6177 | pathogenic | -0.743 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | I |
T/G | 0.5506 | ambiguous | 0.4678 | ambiguous | -1.117 | Destabilizing | 0.991 | D | 0.651 | neutral | None | None | None | None | I |
T/H | 0.696 | likely_pathogenic | 0.5975 | pathogenic | -1.361 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
T/I | 0.5391 | ambiguous | 0.4571 | ambiguous | -0.134 | Destabilizing | 0.994 | D | 0.747 | deleterious | N | 0.471722909 | None | None | I |
T/K | 0.683 | likely_pathogenic | 0.6242 | pathogenic | -0.94 | Destabilizing | 0.991 | D | 0.665 | neutral | None | None | None | None | I |
T/L | 0.3618 | ambiguous | 0.29 | benign | -0.134 | Destabilizing | 0.968 | D | 0.559 | neutral | None | None | None | None | I |
T/M | 0.2164 | likely_benign | 0.1758 | benign | 0.155 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
T/N | 0.3377 | likely_benign | 0.2725 | benign | -0.922 | Destabilizing | 0.994 | D | 0.716 | prob.delet. | N | 0.508984166 | None | None | I |
T/P | 0.216 | likely_benign | 0.1688 | benign | -0.332 | Destabilizing | 0.067 | N | 0.329 | neutral | N | 0.459960855 | None | None | I |
T/Q | 0.5884 | likely_pathogenic | 0.5012 | ambiguous | -1.06 | Destabilizing | 0.995 | D | 0.751 | deleterious | None | None | None | None | I |
T/R | 0.6827 | likely_pathogenic | 0.6063 | pathogenic | -0.687 | Destabilizing | 0.995 | D | 0.74 | deleterious | None | None | None | None | I |
T/S | 0.2096 | likely_benign | 0.1675 | benign | -1.16 | Destabilizing | 0.958 | D | 0.429 | neutral | N | 0.42796308 | None | None | I |
T/V | 0.3637 | ambiguous | 0.3089 | benign | -0.332 | Destabilizing | 0.984 | D | 0.511 | neutral | None | None | None | None | I |
T/W | 0.9283 | likely_pathogenic | 0.8757 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
T/Y | 0.7576 | likely_pathogenic | 0.6673 | pathogenic | -0.485 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.