Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22282 | 67069;67070;67071 | chr2:178580535;178580534;178580533 | chr2:179445262;179445261;179445260 |
N2AB | 20641 | 62146;62147;62148 | chr2:178580535;178580534;178580533 | chr2:179445262;179445261;179445260 |
N2A | 19714 | 59365;59366;59367 | chr2:178580535;178580534;178580533 | chr2:179445262;179445261;179445260 |
N2B | 13217 | 39874;39875;39876 | chr2:178580535;178580534;178580533 | chr2:179445262;179445261;179445260 |
Novex-1 | 13342 | 40249;40250;40251 | chr2:178580535;178580534;178580533 | chr2:179445262;179445261;179445260 |
Novex-2 | 13409 | 40450;40451;40452 | chr2:178580535;178580534;178580533 | chr2:179445262;179445261;179445260 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs745992545 | -0.151 | 0.998 | N | 0.663 | 0.299 | None | gnomAD-2.1.1 | 2.87E-05 | None | None | None | None | I | None | 3.31181E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/H | rs745992545 | -0.151 | 0.998 | N | 0.663 | 0.299 | None | gnomAD-3.1.2 | 9.86E-05 | None | None | None | None | I | None | 3.61829E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | rs745992545 | -0.151 | 0.998 | N | 0.663 | 0.299 | None | gnomAD-4.0.0 | 1.67421E-05 | None | None | None | None | I | None | 3.60567E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7923 | likely_pathogenic | 0.7661 | pathogenic | -1.626 | Destabilizing | 0.968 | D | 0.607 | neutral | None | None | None | None | I |
Y/C | 0.3487 | ambiguous | 0.3144 | benign | -0.587 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.500427051 | None | None | I |
Y/D | 0.8446 | likely_pathogenic | 0.8067 | pathogenic | 0.005 | Stabilizing | 0.998 | D | 0.753 | deleterious | N | 0.453883898 | None | None | I |
Y/E | 0.9468 | likely_pathogenic | 0.9329 | pathogenic | 0.068 | Stabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | I |
Y/F | 0.144 | likely_benign | 0.1465 | benign | -0.619 | Destabilizing | 0.067 | N | 0.397 | neutral | N | 0.438031798 | None | None | I |
Y/G | 0.8034 | likely_pathogenic | 0.76 | pathogenic | -1.907 | Destabilizing | 0.995 | D | 0.728 | prob.delet. | None | None | None | None | I |
Y/H | 0.4189 | ambiguous | 0.3906 | ambiguous | -0.389 | Destabilizing | 0.998 | D | 0.663 | neutral | N | 0.434626133 | None | None | I |
Y/I | 0.7669 | likely_pathogenic | 0.7247 | pathogenic | -0.811 | Destabilizing | 0.982 | D | 0.677 | prob.neutral | None | None | None | None | I |
Y/K | 0.9221 | likely_pathogenic | 0.8916 | pathogenic | -0.705 | Destabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | I |
Y/L | 0.6607 | likely_pathogenic | 0.6284 | pathogenic | -0.811 | Destabilizing | 0.938 | D | 0.534 | neutral | None | None | None | None | I |
Y/M | 0.8002 | likely_pathogenic | 0.769 | pathogenic | -0.624 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
Y/N | 0.5614 | ambiguous | 0.4924 | ambiguous | -1.073 | Destabilizing | 0.998 | D | 0.742 | deleterious | N | 0.471776225 | None | None | I |
Y/P | 0.9647 | likely_pathogenic | 0.9528 | pathogenic | -1.072 | Destabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | I |
Y/Q | 0.8659 | likely_pathogenic | 0.8363 | pathogenic | -0.95 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | I |
Y/R | 0.7948 | likely_pathogenic | 0.7464 | pathogenic | -0.366 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | I |
Y/S | 0.548 | ambiguous | 0.4933 | ambiguous | -1.576 | Destabilizing | 0.994 | D | 0.725 | prob.delet. | N | 0.423291632 | None | None | I |
Y/T | 0.7813 | likely_pathogenic | 0.7342 | pathogenic | -1.416 | Destabilizing | 0.995 | D | 0.731 | prob.delet. | None | None | None | None | I |
Y/V | 0.6563 | likely_pathogenic | 0.6191 | pathogenic | -1.072 | Destabilizing | 0.968 | D | 0.642 | neutral | None | None | None | None | I |
Y/W | 0.5909 | likely_pathogenic | 0.5478 | ambiguous | -0.388 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.