Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22284 | 67075;67076;67077 | chr2:178580529;178580528;178580527 | chr2:179445256;179445255;179445254 |
N2AB | 20643 | 62152;62153;62154 | chr2:178580529;178580528;178580527 | chr2:179445256;179445255;179445254 |
N2A | 19716 | 59371;59372;59373 | chr2:178580529;178580528;178580527 | chr2:179445256;179445255;179445254 |
N2B | 13219 | 39880;39881;39882 | chr2:178580529;178580528;178580527 | chr2:179445256;179445255;179445254 |
Novex-1 | 13344 | 40255;40256;40257 | chr2:178580529;178580528;178580527 | chr2:179445256;179445255;179445254 |
Novex-2 | 13411 | 40456;40457;40458 | chr2:178580529;178580528;178580527 | chr2:179445256;179445255;179445254 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.797 | N | 0.691 | 0.352 | 0.700453235612 | gnomAD-4.0.0 | 6.16186E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39901E-06 | 2.31992E-05 | 1.65854E-05 |
P/S | None | None | 0.994 | N | 0.745 | 0.271 | 0.470155540985 | gnomAD-4.0.0 | 1.36929E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31986E-05 | 0 |
P/T | None | None | 0.988 | N | 0.717 | 0.27 | 0.487772906946 | gnomAD-4.0.0 | 6.84644E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99821E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2041 | likely_benign | 0.1723 | benign | -0.964 | Destabilizing | 0.958 | D | 0.647 | neutral | N | 0.486880871 | None | None | I |
P/C | 0.8419 | likely_pathogenic | 0.8024 | pathogenic | -0.657 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
P/D | 0.8941 | likely_pathogenic | 0.8702 | pathogenic | -0.875 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | I |
P/E | 0.76 | likely_pathogenic | 0.6988 | pathogenic | -0.914 | Destabilizing | 0.998 | D | 0.756 | deleterious | None | None | None | None | I |
P/F | 0.9061 | likely_pathogenic | 0.8529 | pathogenic | -0.84 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | I |
P/G | 0.6349 | likely_pathogenic | 0.5684 | pathogenic | -1.201 | Destabilizing | 0.995 | D | 0.723 | prob.delet. | None | None | None | None | I |
P/H | 0.6399 | likely_pathogenic | 0.5585 | ambiguous | -0.666 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
P/I | 0.7283 | likely_pathogenic | 0.6213 | pathogenic | -0.442 | Destabilizing | 0.334 | N | 0.609 | neutral | None | None | None | None | I |
P/K | 0.6893 | likely_pathogenic | 0.6469 | pathogenic | -0.86 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | I |
P/L | 0.4094 | ambiguous | 0.2979 | benign | -0.442 | Destabilizing | 0.797 | D | 0.691 | prob.neutral | N | 0.488401808 | None | None | I |
P/M | 0.6799 | likely_pathogenic | 0.5775 | pathogenic | -0.444 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | I |
P/N | 0.7465 | likely_pathogenic | 0.6871 | pathogenic | -0.65 | Destabilizing | 0.998 | D | 0.75 | deleterious | None | None | None | None | I |
P/Q | 0.5322 | ambiguous | 0.4582 | ambiguous | -0.84 | Destabilizing | 0.998 | D | 0.758 | deleterious | D | 0.533094043 | None | None | I |
P/R | 0.553 | ambiguous | 0.4996 | ambiguous | -0.308 | Destabilizing | 0.998 | D | 0.747 | deleterious | D | 0.522031687 | None | None | I |
P/S | 0.4099 | ambiguous | 0.3479 | ambiguous | -1.043 | Destabilizing | 0.994 | D | 0.745 | deleterious | N | 0.496173237 | None | None | I |
P/T | 0.3094 | likely_benign | 0.2542 | benign | -0.977 | Destabilizing | 0.988 | D | 0.717 | prob.delet. | N | 0.495786448 | None | None | I |
P/V | 0.5394 | ambiguous | 0.4424 | ambiguous | -0.581 | Destabilizing | 0.839 | D | 0.639 | neutral | None | None | None | None | I |
P/W | 0.9503 | likely_pathogenic | 0.9216 | pathogenic | -0.993 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
P/Y | 0.8833 | likely_pathogenic | 0.8389 | pathogenic | -0.696 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.