Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22285 | 67078;67079;67080 | chr2:178580526;178580525;178580524 | chr2:179445253;179445252;179445251 |
N2AB | 20644 | 62155;62156;62157 | chr2:178580526;178580525;178580524 | chr2:179445253;179445252;179445251 |
N2A | 19717 | 59374;59375;59376 | chr2:178580526;178580525;178580524 | chr2:179445253;179445252;179445251 |
N2B | 13220 | 39883;39884;39885 | chr2:178580526;178580525;178580524 | chr2:179445253;179445252;179445251 |
Novex-1 | 13345 | 40258;40259;40260 | chr2:178580526;178580525;178580524 | chr2:179445253;179445252;179445251 |
Novex-2 | 13412 | 40459;40460;40461 | chr2:178580526;178580525;178580524 | chr2:179445253;179445252;179445251 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.248 | N | 0.303 | 0.141 | 0.414798848334 | gnomAD-4.0.0 | 6.84633E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99815E-07 | 0 | 0 |
V/L | rs754121833 | -0.467 | 0.031 | D | 0.27 | 0.244 | 0.45746916685 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
V/L | rs754121833 | -0.467 | 0.031 | D | 0.27 | 0.244 | 0.45746916685 | gnomAD-4.0.0 | 6.84633E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99815E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7835 | likely_pathogenic | 0.7698 | pathogenic | -1.51 | Destabilizing | 0.954 | D | 0.599 | neutral | N | 0.502168995 | None | None | I |
V/C | 0.8792 | likely_pathogenic | 0.8712 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
V/D | 0.9967 | likely_pathogenic | 0.9954 | pathogenic | -1.331 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | I |
V/E | 0.9885 | likely_pathogenic | 0.9856 | pathogenic | -1.287 | Destabilizing | 0.998 | D | 0.746 | deleterious | D | 0.588319083 | None | None | I |
V/F | 0.6034 | likely_pathogenic | 0.5414 | ambiguous | -1.039 | Destabilizing | 0.991 | D | 0.718 | prob.delet. | None | None | None | None | I |
V/G | 0.9093 | likely_pathogenic | 0.8811 | pathogenic | -1.877 | Destabilizing | 0.998 | D | 0.757 | deleterious | D | 0.562780972 | None | None | I |
V/H | 0.9899 | likely_pathogenic | 0.9857 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
V/I | 0.1061 | likely_benign | 0.106 | benign | -0.585 | Destabilizing | 0.248 | N | 0.303 | neutral | N | 0.475499682 | None | None | I |
V/K | 0.9876 | likely_pathogenic | 0.9837 | pathogenic | -1.322 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
V/L | 0.5053 | ambiguous | 0.4834 | ambiguous | -0.585 | Destabilizing | 0.031 | N | 0.27 | neutral | D | 0.568055218 | None | None | I |
V/M | 0.5461 | ambiguous | 0.5215 | ambiguous | -0.477 | Destabilizing | 0.991 | D | 0.659 | neutral | None | None | None | None | I |
V/N | 0.9816 | likely_pathogenic | 0.9749 | pathogenic | -1.157 | Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | I |
V/P | 0.9853 | likely_pathogenic | 0.9809 | pathogenic | -0.859 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | I |
V/Q | 0.9759 | likely_pathogenic | 0.9699 | pathogenic | -1.248 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | I |
V/R | 0.9754 | likely_pathogenic | 0.9678 | pathogenic | -0.869 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | I |
V/S | 0.923 | likely_pathogenic | 0.9097 | pathogenic | -1.708 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | I |
V/T | 0.8269 | likely_pathogenic | 0.8109 | pathogenic | -1.541 | Destabilizing | 0.985 | D | 0.621 | neutral | None | None | None | None | I |
V/W | 0.9909 | likely_pathogenic | 0.9877 | pathogenic | -1.28 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
V/Y | 0.9516 | likely_pathogenic | 0.939 | pathogenic | -0.976 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.