Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22290 | 67093;67094;67095 | chr2:178580511;178580510;178580509 | chr2:179445238;179445237;179445236 |
N2AB | 20649 | 62170;62171;62172 | chr2:178580511;178580510;178580509 | chr2:179445238;179445237;179445236 |
N2A | 19722 | 59389;59390;59391 | chr2:178580511;178580510;178580509 | chr2:179445238;179445237;179445236 |
N2B | 13225 | 39898;39899;39900 | chr2:178580511;178580510;178580509 | chr2:179445238;179445237;179445236 |
Novex-1 | 13350 | 40273;40274;40275 | chr2:178580511;178580510;178580509 | chr2:179445238;179445237;179445236 |
Novex-2 | 13417 | 40474;40475;40476 | chr2:178580511;178580510;178580509 | chr2:179445238;179445237;179445236 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.811 | N | 0.446 | 0.152 | 0.298056030225 | gnomAD-4.0.0 | 1.59328E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.77236E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0581 | likely_benign | 0.0573 | benign | -0.865 | Destabilizing | 0.004 | N | 0.331 | neutral | N | 0.43553021 | None | None | I |
P/C | 0.509 | ambiguous | 0.5001 | ambiguous | -0.593 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | I |
P/D | 0.667 | likely_pathogenic | 0.6671 | pathogenic | -0.481 | Destabilizing | 0.988 | D | 0.423 | neutral | None | None | None | None | I |
P/E | 0.3682 | ambiguous | 0.3661 | ambiguous | -0.563 | Destabilizing | 0.919 | D | 0.419 | neutral | None | None | None | None | I |
P/F | 0.5239 | ambiguous | 0.5005 | ambiguous | -0.885 | Destabilizing | 0.996 | D | 0.657 | neutral | None | None | None | None | I |
P/G | 0.4309 | ambiguous | 0.4172 | ambiguous | -1.069 | Destabilizing | 0.851 | D | 0.539 | neutral | None | None | None | None | I |
P/H | 0.2764 | likely_benign | 0.2661 | benign | -0.638 | Destabilizing | 0.999 | D | 0.634 | neutral | D | 0.534520982 | None | None | I |
P/I | 0.2064 | likely_benign | 0.1996 | benign | -0.454 | Destabilizing | 0.976 | D | 0.649 | neutral | None | None | None | None | I |
P/K | 0.3149 | likely_benign | 0.3145 | benign | -0.693 | Destabilizing | 0.919 | D | 0.425 | neutral | None | None | None | None | I |
P/L | 0.1203 | likely_benign | 0.1143 | benign | -0.454 | Destabilizing | 0.896 | D | 0.603 | neutral | N | 0.474741959 | None | None | I |
P/M | 0.2459 | likely_benign | 0.2474 | benign | -0.379 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
P/N | 0.4243 | ambiguous | 0.4303 | ambiguous | -0.345 | Destabilizing | 0.988 | D | 0.618 | neutral | None | None | None | None | I |
P/Q | 0.1771 | likely_benign | 0.1784 | benign | -0.578 | Destabilizing | 0.988 | D | 0.439 | neutral | None | None | None | None | I |
P/R | 0.2505 | likely_benign | 0.2383 | benign | -0.166 | Destabilizing | 0.984 | D | 0.623 | neutral | N | 0.451846457 | None | None | I |
P/S | 0.1305 | likely_benign | 0.1286 | benign | -0.77 | Destabilizing | 0.811 | D | 0.446 | neutral | N | 0.480955856 | None | None | I |
P/T | 0.0966 | likely_benign | 0.0968 | benign | -0.749 | Destabilizing | 0.896 | D | 0.447 | neutral | N | 0.420464757 | None | None | I |
P/V | 0.1401 | likely_benign | 0.1385 | benign | -0.555 | Destabilizing | 0.851 | D | 0.555 | neutral | None | None | None | None | I |
P/W | 0.8214 | likely_pathogenic | 0.8013 | pathogenic | -0.982 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/Y | 0.5116 | ambiguous | 0.4936 | ambiguous | -0.698 | Destabilizing | 0.996 | D | 0.658 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.