Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22294 | 67105;67106;67107 | chr2:178580499;178580498;178580497 | chr2:179445226;179445225;179445224 |
N2AB | 20653 | 62182;62183;62184 | chr2:178580499;178580498;178580497 | chr2:179445226;179445225;179445224 |
N2A | 19726 | 59401;59402;59403 | chr2:178580499;178580498;178580497 | chr2:179445226;179445225;179445224 |
N2B | 13229 | 39910;39911;39912 | chr2:178580499;178580498;178580497 | chr2:179445226;179445225;179445224 |
Novex-1 | 13354 | 40285;40286;40287 | chr2:178580499;178580498;178580497 | chr2:179445226;179445225;179445224 |
Novex-2 | 13421 | 40486;40487;40488 | chr2:178580499;178580498;178580497 | chr2:179445226;179445225;179445224 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs2047448209 | None | 0.17 | N | 0.258 | 0.109 | 0.148003135375 | gnomAD-4.0.0 | 2.05367E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99769E-07 | 2.31959E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1308 | likely_benign | 0.1198 | benign | -0.726 | Destabilizing | 0.76 | D | 0.484 | neutral | N | 0.502101971 | None | None | N |
T/C | 0.4377 | ambiguous | 0.3773 | ambiguous | -0.539 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/D | 0.6653 | likely_pathogenic | 0.5865 | pathogenic | 0.072 | Stabilizing | 0.986 | D | 0.69 | prob.neutral | None | None | None | None | N |
T/E | 0.4687 | ambiguous | 0.3869 | ambiguous | 0.105 | Stabilizing | 0.986 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/F | 0.2892 | likely_benign | 0.2515 | benign | -0.814 | Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
T/G | 0.4044 | ambiguous | 0.3745 | ambiguous | -0.997 | Destabilizing | 0.91 | D | 0.615 | neutral | None | None | None | None | N |
T/H | 0.3002 | likely_benign | 0.251 | benign | -1.149 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
T/I | 0.1468 | likely_benign | 0.1326 | benign | -0.093 | Destabilizing | 0.991 | D | 0.747 | deleterious | N | 0.502154878 | None | None | N |
T/K | 0.32 | likely_benign | 0.264 | benign | -0.5 | Destabilizing | 0.986 | D | 0.694 | prob.neutral | None | None | None | None | N |
T/L | 0.1193 | likely_benign | 0.116 | benign | -0.093 | Destabilizing | 0.953 | D | 0.601 | neutral | None | None | None | None | N |
T/M | 0.1215 | likely_benign | 0.1117 | benign | -0.083 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
T/N | 0.1867 | likely_benign | 0.17 | benign | -0.618 | Destabilizing | 0.982 | D | 0.637 | neutral | D | 0.52582854 | None | None | N |
T/P | 0.8576 | likely_pathogenic | 0.8436 | pathogenic | -0.271 | Destabilizing | 0.991 | D | 0.745 | deleterious | D | 0.537945314 | None | None | N |
T/Q | 0.2985 | likely_benign | 0.2487 | benign | -0.653 | Destabilizing | 0.993 | D | 0.755 | deleterious | None | None | None | None | N |
T/R | 0.2747 | likely_benign | 0.2203 | benign | -0.349 | Destabilizing | 0.986 | D | 0.754 | deleterious | None | None | None | None | N |
T/S | 0.1377 | likely_benign | 0.1255 | benign | -0.912 | Destabilizing | 0.17 | N | 0.258 | neutral | N | 0.5016937 | None | None | N |
T/V | 0.1347 | likely_benign | 0.1235 | benign | -0.271 | Destabilizing | 0.953 | D | 0.544 | neutral | None | None | None | None | N |
T/W | 0.746 | likely_pathogenic | 0.6537 | pathogenic | -0.8 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
T/Y | 0.3436 | ambiguous | 0.2892 | benign | -0.515 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.