Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2231 | 6916;6917;6918 | chr2:178775020;178775019;178775018 | chr2:179639747;179639746;179639745 |
N2AB | 2231 | 6916;6917;6918 | chr2:178775020;178775019;178775018 | chr2:179639747;179639746;179639745 |
N2A | 2231 | 6916;6917;6918 | chr2:178775020;178775019;178775018 | chr2:179639747;179639746;179639745 |
N2B | 2185 | 6778;6779;6780 | chr2:178775020;178775019;178775018 | chr2:179639747;179639746;179639745 |
Novex-1 | 2185 | 6778;6779;6780 | chr2:178775020;178775019;178775018 | chr2:179639747;179639746;179639745 |
Novex-2 | 2185 | 6778;6779;6780 | chr2:178775020;178775019;178775018 | chr2:179639747;179639746;179639745 |
Novex-3 | 2231 | 6916;6917;6918 | chr2:178775020;178775019;178775018 | chr2:179639747;179639746;179639745 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.142 | D | 0.471 | 0.36 | 0.370240404367 | gnomAD-4.0.0 | 1.59083E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85691E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9441 | likely_pathogenic | 0.9354 | pathogenic | -2.054 | Highly Destabilizing | 0.968 | D | 0.794 | deleterious | None | None | None | None | N |
L/C | 0.8921 | likely_pathogenic | 0.879 | pathogenic | -1.208 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -2.791 | Highly Destabilizing | 0.998 | D | 0.937 | deleterious | None | None | None | None | N |
L/E | 0.9976 | likely_pathogenic | 0.9972 | pathogenic | -2.469 | Highly Destabilizing | 0.998 | D | 0.907 | deleterious | None | None | None | None | N |
L/F | 0.503 | ambiguous | 0.5065 | ambiguous | -1.263 | Destabilizing | 0.142 | N | 0.471 | neutral | D | 0.550236302 | None | None | N |
L/G | 0.9909 | likely_pathogenic | 0.9892 | pathogenic | -2.64 | Highly Destabilizing | 0.995 | D | 0.909 | deleterious | None | None | None | None | N |
L/H | 0.9839 | likely_pathogenic | 0.9818 | pathogenic | -2.653 | Highly Destabilizing | 0.999 | D | 0.932 | deleterious | D | 0.631295246 | None | None | N |
L/I | 0.3179 | likely_benign | 0.3085 | benign | -0.289 | Destabilizing | 0.919 | D | 0.716 | prob.delet. | D | 0.623982142 | None | None | N |
L/K | 0.9937 | likely_pathogenic | 0.9931 | pathogenic | -1.369 | Destabilizing | 0.995 | D | 0.909 | deleterious | None | None | None | None | N |
L/M | 0.3367 | likely_benign | 0.3191 | benign | -0.554 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
L/N | 0.9968 | likely_pathogenic | 0.9962 | pathogenic | -2.123 | Highly Destabilizing | 0.998 | D | 0.94 | deleterious | None | None | None | None | N |
L/P | 0.9987 | likely_pathogenic | 0.9987 | pathogenic | -0.869 | Destabilizing | 0.998 | D | 0.939 | deleterious | D | 0.631295246 | None | None | N |
L/Q | 0.9766 | likely_pathogenic | 0.9724 | pathogenic | -1.69 | Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
L/R | 0.9842 | likely_pathogenic | 0.9828 | pathogenic | -1.767 | Destabilizing | 0.994 | D | 0.918 | deleterious | D | 0.631295246 | None | None | N |
L/S | 0.9904 | likely_pathogenic | 0.9886 | pathogenic | -2.568 | Highly Destabilizing | 0.995 | D | 0.903 | deleterious | None | None | None | None | N |
L/T | 0.9788 | likely_pathogenic | 0.9739 | pathogenic | -2.074 | Highly Destabilizing | 0.995 | D | 0.837 | deleterious | None | None | None | None | N |
L/V | 0.4154 | ambiguous | 0.4002 | ambiguous | -0.869 | Destabilizing | 0.958 | D | 0.738 | prob.delet. | D | 0.54120758 | None | None | N |
L/W | 0.9605 | likely_pathogenic | 0.9615 | pathogenic | -1.638 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/Y | 0.9642 | likely_pathogenic | 0.9629 | pathogenic | -1.388 | Destabilizing | 0.982 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.