Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22319 | 67180;67181;67182 | chr2:178580424;178580423;178580422 | chr2:179445151;179445150;179445149 |
N2AB | 20678 | 62257;62258;62259 | chr2:178580424;178580423;178580422 | chr2:179445151;179445150;179445149 |
N2A | 19751 | 59476;59477;59478 | chr2:178580424;178580423;178580422 | chr2:179445151;179445150;179445149 |
N2B | 13254 | 39985;39986;39987 | chr2:178580424;178580423;178580422 | chr2:179445151;179445150;179445149 |
Novex-1 | 13379 | 40360;40361;40362 | chr2:178580424;178580423;178580422 | chr2:179445151;179445150;179445149 |
Novex-2 | 13446 | 40561;40562;40563 | chr2:178580424;178580423;178580422 | chr2:179445151;179445150;179445149 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.999 | N | 0.655 | 0.592 | 0.657603740773 | gnomAD-4.0.0 | 1.59248E-06 | None | None | None | None | N | None | 0 | 2.28718E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9299 | likely_pathogenic | 0.9399 | pathogenic | -2.885 | Highly Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
L/C | 0.8837 | likely_pathogenic | 0.8997 | pathogenic | -2.08 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -3.679 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/E | 0.9949 | likely_pathogenic | 0.9952 | pathogenic | -3.361 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/F | 0.5353 | ambiguous | 0.5887 | pathogenic | -1.779 | Destabilizing | 1.0 | D | 0.816 | deleterious | N | 0.497998411 | None | None | N |
L/G | 0.9902 | likely_pathogenic | 0.9917 | pathogenic | -3.479 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/H | 0.9857 | likely_pathogenic | 0.9869 | pathogenic | -3.128 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/I | 0.2166 | likely_benign | 0.2175 | benign | -1.083 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
L/K | 0.9922 | likely_pathogenic | 0.9923 | pathogenic | -2.334 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/M | 0.3392 | likely_benign | 0.3551 | ambiguous | -1.189 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.553311908 | None | None | N |
L/N | 0.997 | likely_pathogenic | 0.9969 | pathogenic | -3.052 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
L/P | 0.9969 | likely_pathogenic | 0.9967 | pathogenic | -1.677 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/Q | 0.974 | likely_pathogenic | 0.975 | pathogenic | -2.718 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/R | 0.9847 | likely_pathogenic | 0.9851 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/S | 0.9904 | likely_pathogenic | 0.9916 | pathogenic | -3.591 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.554832845 | None | None | N |
L/T | 0.973 | likely_pathogenic | 0.9749 | pathogenic | -3.112 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/V | 0.2452 | likely_benign | 0.2461 | benign | -1.677 | Destabilizing | 0.999 | D | 0.655 | neutral | N | 0.500720663 | None | None | N |
L/W | 0.9455 | likely_pathogenic | 0.9527 | pathogenic | -2.193 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.554832845 | None | None | N |
L/Y | 0.9501 | likely_pathogenic | 0.9576 | pathogenic | -1.993 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.